Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34344 | Canola | plastid | 73.64 | 74.22 |
| CDY03378 | Canola | plastid | 73.26 | 73.83 |
| PGSC0003DMT400054153 | Potato | cytosol | 58.14 | 73.53 |
| Bra013865.1-P | Field mustard | plastid | 72.87 | 73.44 |
| VIT_16s0013g00620.t01 | Wine grape | nucleus | 58.53 | 73.3 |
| GSMUA_Achr11P... | Banana | cytosol | 57.36 | 72.55 |
| HORVU1Hr1G055520.1 | Barley | cytosol | 53.88 | 70.92 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 55.04 | 69.95 |
| AT5G07470.1 | Thale cress | cytosol | 53.1 | 67.82 |
| Solyc06g034020.2.1 | Tomato | plastid | 60.85 | 66.24 |
| PGSC0003DMT400055589 | Potato | nucleus | 58.91 | 64.96 |
| AT5G07460.1 | Thale cress | cytosol | 51.55 | 61.01 |
| Solyc03g093690.2.1 | Tomato | plastid | 60.47 | 60.7 |
| AT5G61640.2 | Thale cress | plasma membrane | 52.71 | 59.39 |
| EER94474 | Sorghum | plastid | 57.75 | 58.43 |
| TraesCS1D01G219100.1 | Wheat | plastid | 58.53 | 57.85 |
| Os10t0563600-01 | Rice | plastid | 58.53 | 57.41 |
| Zm00001d029965_P001 | Maize | plastid | 57.36 | 57.14 |
| TraesCS1A01G217300.1 | Wheat | golgi, plastid | 57.36 | 56.7 |
| TraesCS1B01G230500.1 | Wheat | plastid | 57.36 | 56.27 |
| GSMUA_Achr5P18310_001 | Banana | golgi, mitochondrion, plastid | 56.2 | 52.35 |
| AT2G18030.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 25.97 | 26.38 |
Protein Annotations
| Gene3D:3.30.1060.10 | MapMan:50.1.8 | EntrezGene:828616 | ProteinID:AEE85015.1 | ArrayExpress:AT4G25130 | EnsemblPlantsGene:AT4G25130 |
| RefSeq:AT4G25130 | TAIR:AT4G25130 | RefSeq:AT4G25130-TAIR-G | EnsemblPlants:AT4G25130.1 | TAIR:AT4G25130.1 | EMBL:AY049303 |
| EMBL:AY087550 | Unigene:At.24140 | EMBL:BT001033 | ProteinID:CAA65991.1 | ProteinID:CAB36755.1 | ProteinID:CAB79422.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005739 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009570 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0034599 |
| GO:GO:0055114 | InterPro:IPR036509 | HAMAP:MF_01401 | InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | RefSeq:NP_194243.1 |
| UniProt:P54150 | PFAM:PF01625 | Symbol:PMSR4 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000056 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF4 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 |
| UniParc:UPI000012F643 | : | : | : | : | : |
Description
MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
Coordinates
chr4:-:12898514..12900090
Molecular Weight (calculated)
28645.8 Da
IEP (calculated)
8.923
GRAVY (calculated)
-0.526
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.