Factsheet for GSMUA_Achr11P00690_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol	81.77	81.37
VIT_16s0013g00620.t01	Wine grape	nucleus	77.83	76.7
HORVU1Hr1G055520.1	Barley	cytosol	72.91	75.51
KRH46170	Soybean	nucleus	74.38	74.38
PGSC0003DMT400054153	Potato	cytosol	72.91	72.55
EER94474	Sorghum	plastid	81.77	65.1
Zm00001d029965_P001	Maize	plastid	81.28	63.71
Solyc06g034020.2.1	Tomato	plastid	73.89	63.29
GSMUA_Achr2P05990_001	Banana	cytosol	59.11	62.83
TraesCS1A01G217300.1	Wheat	golgi, plastid	80.3	62.45
PGSC0003DMT400055589	Potato	nucleus	71.92	62.39
Os10t0563600-01	Rice	plastid	80.79	62.36
TraesCS1D01G219100.1	Wheat	plastid	79.8	62.07
TraesCS1B01G230500.1	Wheat	plastid	79.8	61.6
GSMUA_Achr5P18310_001	Banana	golgi, mitochondrion, plastid	83.74	61.37
Solyc03g093690.2.1	Tomato	plastid	74.38	58.75
KRH14408	Soybean	nucleus	76.35	58.27
KRH73738	Soybean	nucleus	75.86	57.89
CDX92678	Canola	plastid	70.94	56.69
KRG98772	Soybean	cytosol, plastid	73.4	55.81
CDY11057	Canola	plastid	69.46	55.51
Bra019187.1-P	Field mustard	plastid	68.97	55.12
AT4G25130.1	Thale cress	plastid	69.95	55.04
CDY03378	Canola	plastid	68.97	54.69
CDY34344	Canola	plastid	68.47	54.3
Bra013865.1-P	Field mustard	plastid	68.47	54.3
GSMUA_Achr1P08910_001	Banana	endoplasmic reticulum, golgi	31.53	25.81

Protein Annotations

EnsemblPlants:GSMUA_Achr11P00690_001	EnsemblPlants:GSMUA_Achr11T00690_001	EnsemblPlantsGene:GSMUA_Achr11G00690_001	Gene3D:3.30.1060.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008113	GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	HAMAP:MF_01401	InterPro:IPR036509
InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf	PANTHER:PTHR42799	PANTHER:PTHR42799:SF4	PFAM:PF01625	SEG:seg
SUPFAM:SSF55068	TIGRFAMs:TIGR00401	UniParc:UPI000294DB1A	UniProt:M0RNA0	MapMan:50.1.8	:

Description

Peptide methionine sulfoxide reductase [Source:GMGC_GENE;Acc:GSMUA_Achr11G00690_001]

Coordinates

chr11:+:424223..428533

Molecular Weight (calculated)

22509.1 Da

IEP (calculated)

5.330

GRAVY (calculated)

-0.595

Length

203 amino acids

Sequence
(BLAST)

001: MSWLGKLGFG LGGRAATEAS SAVAQGPDED APAAGQEFAQ FGAGCFWGVE LAFQRVPGVT KTEVGYSQGS LHEPTYEDVC TGATNHAEVV RVQYDPLACS
101: YDDLLQVFWA RHDPTTINRQ ANDVGTQYRS GIYYYTQEQE KAARETMEKH QEVLDRKIVT EILPAKKFYR AEEYHQQYLE KGGRFGSKQS AAKGCSDPIR
201: CYG

Best Arabidopsis Sequence Match ( AT4G25130.1 )
(BLAST)

001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG

Arabidopsis Description

MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.