Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
20363867
extracellular: 22364583 plastid: 22908117 nucleus: 28394025 extracellular: 29876421 |
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400054153 | Potato | cytosol | 78.21 | 98.53 |
| VIT_16s0013g00620.t01 | Wine grape | nucleus | 64.98 | 81.07 |
| GSMUA_Achr11P... | Banana | cytosol | 61.09 | 76.96 |
| HORVU1Hr1G055520.1 | Barley | cytosol | 57.2 | 75.0 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 58.75 | 74.38 |
| KRH46170 | Soybean | nucleus | 57.98 | 73.4 |
| Solyc06g034020.2.1 | Tomato | plastid | 64.98 | 70.46 |
| EER94474 | Sorghum | plastid | 66.15 | 66.67 |
| CDX92678 | Canola | plastid | 64.59 | 65.35 |
| CDY03378 | Canola | plastid | 64.59 | 64.84 |
| CDY34344 | Canola | plastid | 64.59 | 64.84 |
| CDY11057 | Canola | plastid | 63.42 | 64.17 |
| Bra013865.1-P | Field mustard | plastid | 63.81 | 64.06 |
| Bra019187.1-P | Field mustard | plastid | 62.26 | 62.99 |
| KRH14408 | Soybean | nucleus | 64.59 | 62.41 |
| KRH73738 | Soybean | nucleus | 64.59 | 62.41 |
| Os10t0563600-01 | Rice | plastid | 62.65 | 61.22 |
| Zm00001d029965_P001 | Maize | plastid | 61.48 | 61.0 |
| TraesCS1A01G217300.1 | Wheat | golgi, plastid | 61.48 | 60.54 |
| AT4G25130.1 | Thale cress | plastid | 60.7 | 60.47 |
| TraesCS1D01G219100.1 | Wheat | plastid | 59.53 | 58.62 |
| TraesCS1B01G230500.1 | Wheat | plastid | 59.92 | 58.56 |
| Solyc03g111720.2.1 | Tomato | extracellular, plastid | 44.36 | 58.16 |
| KRG98772 | Soybean | cytosol, plastid | 59.92 | 57.68 |
| GSMUA_Achr5P18310_001 | Banana | golgi, mitochondrion, plastid | 58.75 | 54.51 |
| Solyc02g084030.2.1 | Tomato | nucleus | 24.9 | 25.4 |
| Solyc02g063250.2.1 | Tomato | cytosol | 25.29 | 24.71 |
Protein Annotations
| EnsemblPlants:Solyc03g093690.2.1 | EnsemblPlantsGene:Solyc03g093690.2 | Gene3D:3.30.1060.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | HAMAP:MF_01401 | InterPro:IPR036509 |
| InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF4 | PFAM:PF01625 | ProteinID:AEN03272.1 |
| SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | UniParc:UPI000229035C | UniProt:G3K2M4 | MapMan:50.1.8 | : |
Description
Peptide methionine sulfoxide reductase A4, chloroplastic [Source:Projected from Arabidopsis thaliana (AT4G25130) UniProtKB/Swiss-Prot;Acc:P54150]
Coordinates
chr3:+:55324475..55327404
Molecular Weight (calculated)
28930.1 Da
IEP (calculated)
8.544
GRAVY (calculated)
-0.560
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLKTCLPSS TIATKSPLIS FSKSTLLLPP FSRKVSSTFP RTSKTPSLYS PPKMSWLNKL GFGARTDTPM DSSSSAIPQG PDTDIPAPGQ QFVQFGAGCF
101: WGVELAFQRV PGVTKTEVGY SQGYLDNPTY EDICSGNTFH SEVVRVQYDP KECNFDTLLD VFWDRHDPTT LNRQGNDVGT QYRSGIYFYT PEQEKAALEA
201: RDRQQKILNR NIVTEILPAK KFYRAEEYHQ QYLAKGGRFG FRQSVEKGCN DPIRCYG
101: WGVELAFQRV PGVTKTEVGY SQGYLDNPTY EDICSGNTFH SEVVRVQYDP KECNFDTLLD VFWDRHDPTT LNRQGNDVGT QYRSGIYFYT PEQEKAALEA
201: RDRQQKILNR NIVTEILPAK KFYRAEEYHQ QYLAKGGRFG FRQSVEKGCN DPIRCYG
001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
Arabidopsis Description
MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.