Factsheet for HORVU1Hr1G055520.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25130.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	75.51	72.91
VIT_16s0013g00620.t01	Wine grape	nucleus	74.49	70.87
KRH46170	Soybean	nucleus	72.96	70.44
GSMUA_Achr11P...	Banana	cytosol	72.96	70.1
PGSC0003DMT400054153	Potato	cytosol	72.45	69.61
TraesCS1A01G217300.1	Wheat	golgi, plastid	89.29	67.05
TraesCS1D01G219100.1	Wheat	plastid	88.78	66.67
TraesCS1B01G230500.1	Wheat	plastid	88.27	65.78
EER94474	Sorghum	plastid	83.67	64.31
Zm00001d029965_P001	Maize	plastid	83.67	63.32
Os10t0563600-01	Rice	plastid	82.65	61.6
PGSC0003DMT400055589	Potato	nucleus	70.92	59.4
Solyc06g034020.2.1	Tomato	plastid	71.43	59.07
Solyc03g093690.2.1	Tomato	plastid	75.0	57.2
CDX92678	Canola	plastid	73.98	57.09
Bra019187.1-P	Field mustard	plastid	73.98	57.09
KRH14408	Soybean	nucleus	76.53	56.39
CDY11057	Canola	plastid	72.96	56.3
KRH73738	Soybean	nucleus	76.02	56.02
AT4G25130.1	Thale cress	plastid	70.92	53.88
CDY03378	Canola	plastid	69.39	53.12
Bra013865.1-P	Field mustard	plastid	68.88	52.73
CDY34344	Canola	plastid	68.88	52.73
KRG98772	Soybean	cytosol, plastid	71.43	52.43
GSMUA_Achr5P18310_001	Banana	golgi, mitochondrion, plastid	71.94	50.9
HORVU2Hr1G083170.1	Barley	cytosol, plastid	44.9	35.48
HORVU7Hr1G018320.4	Barley	plastid	33.67	23.74

Protein Annotations

Gene3D:3.30.1060.10	MapMan:50.1.8	UniProt:A0A287FPM3	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006950	GO:GO:0006979
GO:GO:0008113	GO:GO:0008150	GO:GO:0008152	GO:GO:0009416	GO:GO:0009507	GO:GO:0009536
GO:GO:0009570	GO:GO:0009628	GO:GO:0009651	GO:GO:0009719	GO:GO:0009735	GO:GO:0009941
GO:GO:0009987	GO:GO:0034599	GO:GO:0055114	EnsemblPlantsGene:HORVU1Hr1G055520	EnsemblPlants:HORVU1Hr1G055520.1	InterPro:IPR036509
HAMAP:MF_01401	InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf	PFAM:PF01625	PANTHER:PTHR42799	PANTHER:PTHR42799:SF4
SUPFAM:SSF55068	TIGRFAMs:TIGR00401	UniParc:UPI000B4773C3	:	:	:

Description

No Description!

Coordinates

chrchr1H:+:406533021..406535376

Molecular Weight (calculated)

21814.4 Da

IEP (calculated)

5.685

GRAVY (calculated)

-0.660

Length

196 amino acids

Sequence
(BLAST)

001: MPPLLTSPAF LXSAALAQGP DEDKPAPGNE FAQFGAGCFW GVELVFQRVP GVTRTEVGYS QGAFHDPTYE DVCTGATGHN EVVRVQYDPA ACKFDDLLDT
101: FWARHDPTTP NRQGGDVGTQ YRSGIYYYTP EQEKAALESL EKQQKVQNRK IVTEILPAKR FYRAEEYHQQ YLAKGGRFGF KQSTEKGCND PIRCYG

Best Arabidopsis Sequence Match ( AT4G25130.1 )
(BLAST)

001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG

Arabidopsis Description

MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.