Factsheet for HORVU2Hr1G083170.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G323300.1	Wheat	cytosol	54.44	74.59
TraesCS2B01G359300.1	Wheat	cytosol	54.44	74.59
TraesCS2D01G339600.1	Wheat	cytosol	53.63	73.48
Zm00001d003271_P001	Maize	cytosol, extracellular	45.97	61.62
Os04t0482000-01	Rice	plasma membrane	46.37	61.5
EES12389	Sorghum	cytosol	45.16	60.54
Os04t0482100-00	Rice	cytosol	43.95	57.37
EES12392	Sorghum	cytosol, mitochondrion, peroxisome	39.11	50.79
HORVU1Hr1G055520.1	Barley	cytosol	35.48	44.9
HORVU7Hr1G018320.4	Barley	plastid	19.76	17.63

Protein Annotations

EnsemblPlants:HORVU2Hr1G083170.1	EnsemblPlantsGene:HORVU2Hr1G083170	Gene3D:3.30.1060.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008113
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	HAMAP:MF_01401	InterPro:IPR036509	InterPro:Met_Sox_Rdtase_MsrA
InterPro:Met_Sox_Rdtase_MsrA_sf	ncoils:Coil	PANTHER:PTHR42799	PANTHER:PTHR42799:SF8	PFAM:PF01625	SEG:seg
SUPFAM:SSF55068	TIGRFAMs:TIGR00401	UniParc:UPI000B46CEC8	UniProt:A0A287IP51	MapMan:50.1.8	:

Description

No Description!

Coordinates

chrchr2H:+:605039510..605056995

Molecular Weight (calculated)

23463.3 Da

IEP (calculated)

8.459

GRAVY (calculated)

-0.796

Length

248 amino acids

Sequence
(BLAST)

001: FARRKWPHAH VSPAPDNPFP ENKIQFDWPR HKTCTSSPID HRAPVRPLQQ IHSILEKSTP HATGNAMSSS TGAAGPDADX XXXXXXXXXX XXXXXXXXXX
101: XXXXXXXXXX XXXXXXXXXX LDGPTYRDVC GGGTGHSEVV RVHYDPKDCP YAVLLDVFWA KHNPTTLNKQ GNDVGTQYRS GIYYYTAEQE RQARESLAEK
201: QREWKEKIVT EVLPARRFYP AEDYHQQYLE KGGQSAKKRC SDPIRCYG

Best Arabidopsis Sequence Match ( AT5G07470.1 )
(BLAST)

001: MNILNRLGLG SSGQTNMDPS PIAQGNDDDT PAPGNQFAQF GAGCFWGVEL AFQRVPGVTQ TEAGYTQGTV DNPSYGDVCS GTTGHSEVVR VQYDLNDCTY
101: ESLLDLFWSR HDPTTLNRQG NDVGTQYRSG IYFYTPEQEK LARESLERHQ QQMERKIMTE ILPAKKFYRA EEHHQQYLSK GGRFGQGQST AKGCNDPIRC
201: YG

Arabidopsis Description

MSRA3PMSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UH75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.