Factsheet for Zm00001d003271_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

extracellular: 20408568

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES12389	Sorghum	cytosol	93.51	93.51
Os04t0482000-01	Rice	plasma membrane	86.49	85.56
TraesCS2A01G323300.1	Wheat	cytosol	82.16	83.98
TraesCS2B01G359300.1	Wheat	cytosol	81.62	83.43
TraesCS2D01G339600.1	Wheat	cytosol	81.08	82.87
Os04t0482100-00	Rice	cytosol	80.54	78.42
Zm00001d029965_P001	Maize	plastid	66.49	47.49
HORVU2Hr1G083170.1	Barley	cytosol, plastid	61.62	45.97
Zm00001d045418_P001	Maize	mitochondrion	35.14	26.64

Protein Annotations

EntrezGene:100283982	Gene3D:3.30.1060.10	MapMan:50.1.8	UniProt:B6TNT5	EMBL:EU966650	GO:GO:0003674
GO:GO:0003824	GO:GO:0008113	GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	InterPro:IPR036509
HAMAP:MF_01401	InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf	ProteinID:ONM16652.1	PFAM:PF01625	PANTHER:PTHR42799
PANTHER:PTHR42799:SF8	SUPFAM:SSF55068	TIGRFAMs:TIGR00401	UniParc:UPI000182D659	EnsemblPlantsGene:Zm00001d003271	EnsemblPlants:Zm00001d003271_P001
EnsemblPlants:Zm00001d003271_T001	:	:	:	:	:

Description

Peptide methionine sulfoxide reductase

Coordinates

chr2:+:38437219..38439671

Molecular Weight (calculated)

20505.8 Da

IEP (calculated)

6.232

GRAVY (calculated)

-0.545

Length

185 amino acids

Sequence
(BLAST)

001: MSTADAASPA LAPDWDAPAG EGLALAQFAA GCFWSVELVY QRLPGVARTE VGYSQGHRHA PTYRDVCGNG TGHAEVVRVH YDPKACPYDV LLDVFWAKHN
101: PTTLNRQGND VGTQYRSGIY YYTAEQETLA RESLAAKQKE WQDAIVTEVL PARRFYPAEE YHQQYLEKGG QSAKKGCSDP IRCYG

Best Arabidopsis Sequence Match ( AT5G61640.2 )
(BLAST)

001: MFRRISRRFL FTTFLCFSVS LSLQNFSMNI LNKLGIGSSR QTNMDPSPIA QVIDDEAPAP GNQFTQFGAG CFWSVELAYQ RVPGVTQTEV GYSQGITHDP
101: SYKDVCSGTT NHAEIVRVQY DPKECSYQSL LDLFWSKHDP TTLNRQGNDV GTQYRSGIYF YNPEQEKLAR ESLERHQQQV DRKVVTEILP AKKFYRAEEH
201: HQQYLSKGGR FGLKQSTEKG CNDPIRCYG

Arabidopsis Description

PMSR1peptidemethionine sulfoxide reductase 1 [Source:TAIR;Acc:AT5G61640]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.