Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G25130.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT4G25130.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra013865.1-P | Field mustard | plastid | 99.22 | 99.22 |
| CDY03378 | Canola | plastid | 98.83 | 98.83 |
| VIT_16s0013g00620.t01 | Wine grape | nucleus | 60.55 | 75.24 |
| PGSC0003DMT400054153 | Potato | cytosol | 59.38 | 74.51 |
| CDY11057 | Canola | plastid | 73.83 | 74.41 |
| AT4G25130.1 | Thale cress | plastid | 74.22 | 73.64 |
| CDX92678 | Canola | plastid | 71.88 | 72.44 |
| GSMUA_Achr11P... | Banana | cytosol | 57.42 | 72.06 |
| CDX78295 | Canola | cytosol | 50.78 | 70.65 |
| CDY67000 | Canola | cytosol | 50.39 | 70.11 |
| CDX70042 | Canola | cytosol | 55.08 | 69.8 |
| CDX81054 | Canola | cytosol | 21.48 | 69.62 |
| CDX81055 | Canola | cytosol | 50.0 | 69.57 |
| CDX81053 | Canola | cytosol, nucleus, plastid | 49.61 | 69.02 |
| HORVU1Hr1G055520.1 | Barley | cytosol | 52.73 | 68.88 |
| CDX81057 | Canola | cytosol | 49.22 | 68.48 |
| CDX81056 | Canola | cytosol | 49.22 | 68.48 |
| CDX78294 | Canola | cytosol | 49.22 | 68.48 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 54.3 | 68.47 |
| CDY65236 | Canola | nucleus | 53.91 | 68.32 |
| Solyc06g034020.2.1 | Tomato | plastid | 61.33 | 66.24 |
| PGSC0003DMT400055589 | Potato | nucleus | 59.77 | 65.38 |
| Solyc03g093690.2.1 | Tomato | plastid | 64.84 | 64.59 |
| CDY65235 | Canola | nucleus | 48.83 | 61.27 |
| CDX70041 | Canola | nucleus | 48.44 | 60.78 |
| EER94474 | Sorghum | plastid | 60.16 | 60.39 |
| CDX78293 | Canola | nucleus | 50.39 | 58.37 |
| Zm00001d029965_P001 | Maize | plastid | 58.98 | 58.3 |
| TraesCS1A01G217300.1 | Wheat | golgi, plastid | 58.2 | 57.09 |
| Os10t0563600-01 | Rice | plastid | 58.59 | 57.03 |
| CDX81052 | Canola | cytosol, mitochondrion, nucleus | 49.22 | 57.01 |
| TraesCS1D01G219100.1 | Wheat | plastid | 57.81 | 56.7 |
| TraesCS1B01G230500.1 | Wheat | plastid | 57.03 | 55.51 |
| CDY02125 | Canola | nucleus | 44.14 | 55.39 |
| CDY23047 | Canola | endoplasmic reticulum, extracellular | 42.58 | 54.5 |
| GSMUA_Achr5P18310_001 | Banana | golgi, mitochondrion, plastid | 57.42 | 53.07 |
| CDY41436 | Canola | cytosol, nucleus, plastid | 14.84 | 50.0 |
| CDY54549 | Canola | vacuole | 26.56 | 27.2 |
| CDY30332 | Canola | vacuole | 26.56 | 27.2 |
Protein Annotations
| Gene3D:3.30.1060.10 | MapMan:50.1.8 | GO:A0A078HA22 | UniProt:A0A078HA22 | EnsemblPlants:CDY34344 | ProteinID:CDY34344 |
| ProteinID:CDY34344.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00056383001 | InterPro:IPR036509 | HAMAP:MF_01401 | InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf |
| PFAM:PF01625 | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF4 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | UniParc:UPI0003E6A40E |
| SEG:seg | : | : | : | : | : |
Description
BnaA01g14470DBnaA01g14470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HA22]
Coordinates
chrLK032332:-:384984..386345
Molecular Weight (calculated)
28354.4 Da
IEP (calculated)
9.026
GRAVY (calculated)
-0.560
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSLVASPPV ISAASLSKPL QSLSKAALSL SKRAKPTSPF PKTARSISVY KSPMNNLFTR LGFGSRPQPD PASAAIAQGP DDDVPSPGQQ FAQFGAGCFW
101: GAELAYQRVP GVTKTEVGYS HGFVDNPSYE DVCSETTGHN EIVRVQYDPK EVSFESLLDV FWKRHDPTTL NRQGNDVGTR YRSGIYFYTD EQEKLAREAM
201: EKQQKILNRK IVTEILPATK FYRAENYHQQ YLAKGGRMGL SQSAEKGCND PIRCYG
101: GAELAYQRVP GVTKTEVGYS HGFVDNPSYE DVCSETTGHN EIVRVQYDPK EVSFESLLDV FWKRHDPTTL NRQGNDVGTR YRSGIYFYTD EQEKLAREAM
201: EKQQKILNRK IVTEILPATK FYRAENYHQQ YLAKGGRMGL SQSAEKGCND PIRCYG
001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
Arabidopsis Description
MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.