Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009260.1-P | Field mustard | cytosol | 99.5 | 99.5 |
| CDY65236 | Canola | nucleus | 97.03 | 97.03 |
| AT5G07470.1 | Thale cress | cytosol | 86.63 | 86.63 |
| CDX81055 | Canola | cytosol | 70.79 | 77.72 |
| CDX78294 | Canola | cytosol | 70.3 | 77.17 |
| CDX81053 | Canola | cytosol, nucleus, plastid | 70.3 | 77.17 |
| CDX78295 | Canola | cytosol | 69.8 | 76.63 |
| CDY67000 | Canola | cytosol | 69.31 | 76.09 |
| CDX81054 | Canola | cytosol | 29.7 | 75.95 |
| CDX81057 | Canola | cytosol | 68.81 | 75.54 |
| CDX81056 | Canola | cytosol | 68.32 | 75.0 |
| KRH46170 | Soybean | nucleus | 70.3 | 69.95 |
| CDY65235 | Canola | nucleus | 69.31 | 68.63 |
| CDX70041 | Canola | nucleus | 67.82 | 67.16 |
| CDX78293 | Canola | nucleus | 68.32 | 62.44 |
| CDX81052 | Canola | cytosol, mitochondrion, nucleus | 67.82 | 61.99 |
| CDY02125 | Canola | nucleus | 60.4 | 59.8 |
| CDY23047 | Canola | endoplasmic reticulum, extracellular | 58.42 | 59.0 |
| CDY34344 | Canola | plastid | 69.8 | 55.08 |
| KRH73738 | Soybean | nucleus | 72.28 | 54.89 |
| CDY03378 | Canola | plastid | 69.31 | 54.69 |
| KRH14408 | Soybean | nucleus | 71.78 | 54.51 |
| CDY11057 | Canola | plastid | 68.32 | 54.33 |
| CDX92678 | Canola | plastid | 68.32 | 54.33 |
| KRG98772 | Soybean | cytosol, plastid | 69.8 | 52.81 |
| CDY41436 | Canola | cytosol, nucleus, plastid | 17.33 | 46.05 |
| CDY54549 | Canola | vacuole | 32.67 | 26.4 |
| CDY30332 | Canola | vacuole | 32.18 | 26.0 |
Protein Annotations
| EnsemblPlants:CDX70042 | EnsemblPlantsGene:GSBRNA2T00136140001 | Gene3D:3.30.1060.10 | GO:A0A078C033 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | HAMAP:MF_01401 | InterPro:IPR036509 |
| InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF9 | PFAM:PF01625 | ProteinID:CDX70042 |
| ProteinID:CDX70042.1 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | UniParc:UPI0004EEDA4B | MapMan:50.1.8 | : |
Description
BnaA10g23910D
Coordinates
chrLK031790:-:2826405..2827659
Molecular Weight (calculated)
22675.4 Da
IEP (calculated)
6.015
GRAVY (calculated)
-0.751
Length
202 amino acids
Sequence
(BLAST)
(BLAST)
001: MNILNRFGLG SGGQTSTDPS PIAQGPDDDA PAPGNHFAQF AAGCFWGVEL AFQRLPGVTQ TEVGYTQGIT HNPSYEDVCS ETTGHAEVVR VQYDPKDCTF
101: ESLLDLFWSR HDPTTLNRQG NDVGTRYRSG IYFYTPEQEK LARESLERHQ QKMERKIMTE ILPAKKFYRA EEQQQQYLSK GGRYGMGQSC AKGCTDPIRC
201: YG
101: ESLLDLFWSR HDPTTLNRQG NDVGTRYRSG IYFYTPEQEK LARESLERHQ QKMERKIMTE ILPAKKFYRA EEQQQQYLSK GGRYGMGQSC AKGCTDPIRC
201: YG
001: MNILNRLGLG SSGQTNMDPS PIAQGNDDDT PAPGNQFAQF GAGCFWGVEL AFQRVPGVTQ TEAGYTQGTV DNPSYGDVCS GTTGHSEVVR VQYDLNDCTY
101: ESLLDLFWSR HDPTTLNRQG NDVGTQYRSG IYFYTPEQEK LARESLERHQ QQMERKIMTE ILPAKKFYRA EEHHQQYLSK GGRFGQGQST AKGCNDPIRC
201: YG
101: ESLLDLFWSR HDPTTLNRQG NDVGTQYRSG IYFYTPEQEK LARESLERHQ QQMERKIMTE ILPAKKFYRA EEHHQQYLSK GGRFGQGQST AKGCNDPIRC
201: YG
Arabidopsis Description
MSRA3PMSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UH75]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.