Factsheet for GSMUA_Achr5P18310_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:

nucleus 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, mitochondrion, plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	nucleus
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	61.37	83.74
GSMUA_Achr11P...	Banana	cytosol	59.93	81.37
VIT_16s0013g00620.t01	Wine grape	nucleus	58.48	78.64
KRH46170	Soybean	nucleus	53.79	73.4
PGSC0003DMT400054153	Potato	cytosol	53.43	72.55
HORVU1Hr1G055520.1	Barley	cytosol	50.9	71.94
EER94474	Sorghum	plastid	60.65	65.88
Solyc06g034020.2.1	Tomato	plastid	55.6	64.98
PGSC0003DMT400055589	Potato	nucleus	53.43	63.25
Zm00001d029965_P001	Maize	plastid	58.84	62.93
GSMUA_Achr2P05990_001	Banana	cytosol	42.96	62.3
TraesCS1D01G219100.1	Wheat	plastid	58.48	62.07
TraesCS1B01G230500.1	Wheat	plastid	58.84	61.98
TraesCS1A01G217300.1	Wheat	golgi, plastid	57.04	60.54
Bra019187.1-P	Field mustard	plastid	55.23	60.24
CDY11057	Canola	plastid	54.87	59.84
Os10t0563600-01	Rice	plastid	56.32	59.32
KRH14408	Soybean	nucleus	56.68	59.02
Solyc03g093690.2.1	Tomato	plastid	54.51	58.75
CDX92678	Canola	plastid	53.79	58.66
KRH73738	Soybean	nucleus	55.6	57.89
CDY03378	Canola	plastid	53.43	57.81
Bra013865.1-P	Field mustard	plastid	53.07	57.42
CDY34344	Canola	plastid	53.07	57.42
KRG98772	Soybean	cytosol, plastid	54.51	56.55
AT4G25130.1	Thale cress	plastid	52.35	56.2
GSMUA_Achr1P08910_001	Banana	endoplasmic reticulum, golgi	24.19	27.02

Protein Annotations

EnsemblPlants:GSMUA_Achr5P18310_001	EnsemblPlants:GSMUA_Achr5T18310_001	EnsemblPlantsGene:GSMUA_Achr5G18310_001	Gene3D:3.30.1060.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008113	GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	HAMAP:MF_01401	InterPro:IPR036509
InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf	PANTHER:PTHR42799	PANTHER:PTHR42799:SF4	PFAM:PF01625	SEG:seg
SUPFAM:SSF55068	TIGRFAMs:TIGR00401	UniParc:UPI0002968F8E	UniProt:M0SZL0	MapMan:50.1.8	:

Description

Peptide methionine sulfoxide reductase [Source:GMGC_GENE;Acc:GSMUA_Achr5G18310_001]

Coordinates

chr5:-:19770576..19774843

Molecular Weight (calculated)

30654.3 Da

IEP (calculated)

8.703

GRAVY (calculated)

-0.382

Length

277 amino acids

Sequence
(BLAST)

001: MKKRNFGGCG TLLVNHVTVT TMPFLIFNPS VADAPLVVLA YHRLPKFPIK PLLFSPCFEP SSFPSSAPSC INRMSWFGKL GFVLGGRGAA PLASSAIAQG
101: RDDDVPATGQ EFAQFGAGCF WGVELAFQRV PGVTRTEVGY SQGTLHEPTY EDVCSGTTNH SEIVRVQYDP RGCSYGDLLN VFWARHDPTT VNRQGNDVGT
201: QYRSGIYFYT AEQEKAARES MERHQKASSR KIVTEILPAK KFYKAEEYHQ QYLEKGGRFG HKQSASKGCS DPIRCYG

Best Arabidopsis Sequence Match ( AT5G07470.1 )
(BLAST)

001: MNILNRLGLG SSGQTNMDPS PIAQGNDDDT PAPGNQFAQF GAGCFWGVEL AFQRVPGVTQ TEAGYTQGTV DNPSYGDVCS GTTGHSEVVR VQYDLNDCTY
101: ESLLDLFWSR HDPTTLNRQG NDVGTQYRSG IYFYTPEQEK LARESLERHQ QQMERKIMTE ILPAKKFYRA EEHHQQYLSK GGRFGQGQST AKGCNDPIRC
201: YG

Arabidopsis Description

MSRA3PMSR3 [Source:UniProtKB/TrEMBL;Acc:A0A178UH75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.