Factsheet for Bra013865.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	plastid
Plant-mPloc:	nucleus, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra027469.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G25130.1	Bra027469.1-P	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34344	Canola	plastid	99.22	99.22
CDY03378	Canola	plastid	98.05	98.05
VIT_16s0013g00620.t01	Wine grape	nucleus	60.16	74.76
PGSC0003DMT400054153	Potato	cytosol	58.59	73.53
AT4G25130.1	Thale cress	plastid	73.44	72.87
Bra019187.1-P	Field mustard	plastid	72.27	72.83
GSMUA_Achr11P...	Banana	cytosol	57.42	72.06
Bra005938.1-P	Field mustard	cytosol	50.78	70.65
Bra005937.1-P	Field mustard	cytosol	50.0	69.57
Bra005939.1-P	Field mustard	cytosol	50.0	69.19
HORVU1Hr1G055520.1	Barley	cytosol	52.73	68.88
Bra009260.1-P	Field mustard	cytosol	54.3	68.81
Bra005940.1-P	Field mustard	cytosol	49.22	68.48
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	54.3	68.47
Solyc06g034020.2.1	Tomato	plastid	60.94	65.82
Bra012934.1-P	Field mustard	cytosol	33.2	65.38
PGSC0003DMT400055589	Potato	nucleus	59.38	64.96
Solyc03g093690.2.1	Tomato	plastid	64.06	63.81
Bra009261.1-P	Field mustard	nucleus	48.44	60.78
EER94474	Sorghum	plastid	60.16	60.39
Bra040258.1-P	Field mustard	nucleus	12.5	59.26
Zm00001d029965_P001	Maize	plastid	58.98	58.3
TraesCS1A01G217300.1	Wheat	golgi, plastid	58.2	57.09
Os10t0563600-01	Rice	plastid	58.59	57.03
TraesCS1D01G219100.1	Wheat	plastid	57.81	56.7
TraesCS1B01G230500.1	Wheat	plastid	57.03	55.51
GSMUA_Achr5P18310_001	Banana	golgi, mitochondrion, plastid	57.42	53.07
Bra016336.1-P	Field mustard	cytosol, nucleus, plastid	15.23	51.32
Bra005936.1-P	Field mustard	cytosol	50.39	49.05
Bra037241.1-P	Field mustard	vacuole	26.56	27.2

Protein Annotations

Gene3D:3.30.1060.10	MapMan:50.1.8	EnsemblPlantsGene:Bra013865	EnsemblPlants:Bra013865.1	EnsemblPlants:Bra013865.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006950	GO:GO:0008113	GO:GO:0008150	GO:GO:0008152	GO:GO:0009416	GO:GO:0009507
GO:GO:0009536	GO:GO:0009570	GO:GO:0009628	GO:GO:0009719	GO:GO:0009735	GO:GO:0009941
GO:GO:0009987	GO:GO:0034599	GO:GO:0055114	InterPro:IPR036509	UniProt:M4DBK5	HAMAP:MF_01401
InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf	PFAM:PF01625	PANTHER:PTHR42799	PANTHER:PTHR42799:SF4	SUPFAM:SSF55068
TIGRFAMs:TIGR00401	UniParc:UPI0002546835	SEG:seg	:	:	:

Description

AT4G25130 (E=3e-113) | peptide methionine sulfoxide reductase, putative

Coordinates

chrA01:-:8129915..8131051

Molecular Weight (calculated)

28355.3 Da

IEP (calculated)

8.804

GRAVY (calculated)

-0.589

Length

256 amino acids

Sequence
(BLAST)

001: MLSLVASPPV ISAASLSKPL QSLSKAALSL SKRAKPTSPF PKTARSISVY KSPMNNLFTR LGFGSRPQPD PASAAIAQGP DDDVPSPGQQ FAQFGAGCFW
101: GAELAYQRVP GVTKTEVGYS HGFVDNPSYE DVCSETTGHN EIVRVQYDPQ EVSFESLLDV FWKRHDPTTL NRQGNDVGTR YRSGIYFYTD EQEKLAREAM
201: EKQQKNLNRK IVTEILPATK FYRAENYHQQ YLAKGGRMGL SQSAEKGCND PIRCYG

Best Arabidopsis Sequence Match ( AT4G25130.1 )
(BLAST)

001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG

Arabidopsis Description

MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.