Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02125 | Canola | nucleus | 94.62 | 60.29 |
| Bra040258.1-P | Field mustard | nucleus | 21.54 | 51.85 |
| Bra009260.1-P | Field mustard | cytosol | 72.31 | 46.53 |
| Bra005937.1-P | Field mustard | cytosol | 62.31 | 44.02 |
| Bra005938.1-P | Field mustard | cytosol | 62.31 | 44.02 |
| KRH46170 | Soybean | nucleus | 68.46 | 43.84 |
| AT5G61640.2 | Thale cress | plasma membrane | 76.15 | 43.23 |
| Bra005940.1-P | Field mustard | cytosol | 60.77 | 42.93 |
| Bra005939.1-P | Field mustard | cytosol | 60.77 | 42.7 |
| Bra009261.1-P | Field mustard | nucleus | 63.08 | 40.2 |
| Bra016336.1-P | Field mustard | cytosol, nucleus, plastid | 23.08 | 39.47 |
| KRH73738 | Soybean | nucleus | 70.0 | 34.21 |
| Bra019187.1-P | Field mustard | plastid | 65.38 | 33.46 |
| KRH14408 | Soybean | nucleus | 68.46 | 33.46 |
| KRG98772 | Soybean | cytosol, plastid | 68.46 | 33.33 |
| Bra013865.1-P | Field mustard | plastid | 65.38 | 33.2 |
| Bra005936.1-P | Field mustard | cytosol | 61.54 | 30.42 |
| Bra037241.1-P | Field mustard | vacuole | 30.0 | 15.6 |
Protein Annotations
| EnsemblPlants:Bra012934.1 | EnsemblPlants:Bra012934.1-P | EnsemblPlantsGene:Bra012934 | Gene3D:3.30.1060.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:IPR036509 | InterPro:Met_Sox_Rdtase_MsrA |
| InterPro:Met_Sox_Rdtase_MsrA_sf | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF4 | PFAM:PF01625 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 |
| UniParc:UPI00025405DF | UniProt:M4D8X4 | MapMan:50.1.8 | : | : | : |
Description
AT5G61640 (E=1e-057) PMSR1, ATMSRA1 | PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase
Coordinates
chrA03:+:21435923..21436655
Molecular Weight (calculated)
15117.6 Da
IEP (calculated)
6.764
GRAVY (calculated)
-0.896
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MHNPSYEDAC SGTSNHVEVV RNQYDLKECR FESLLELFWW SMHDPTTLNR QGNNVGSQYR SGIYYYNPEQ EKLARESLEY IGRKIVTEIL PATKFYRAEE
101: DNQQYLSKGG RFGLKQSSAK GCNDPIRCYG
101: DNQQYLSKGG RFGLKQSSAK GCNDPIRCYG
001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
Arabidopsis Description
MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.