Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 4
- nucleus 2
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G07470.1 | Thale cress | cytosol | 73.36 | 83.17 |
| Bra012934.1-P | Field mustard | cytosol | 43.23 | 76.15 |
| KRH46170 | Soybean | nucleus | 61.14 | 68.97 |
| CDY23047 | Canola | endoplasmic reticulum, extracellular | 55.02 | 63.0 |
| CDY02125 | Canola | nucleus | 55.02 | 61.76 |
| AT5G07460.1 | Thale cress | cytosol | 58.08 | 61.01 |
| KRH73738 | Soybean | nucleus | 64.63 | 55.64 |
| KRH14408 | Soybean | nucleus | 64.19 | 55.26 |
| KRG98772 | Soybean | cytosol, plastid | 62.01 | 53.18 |
| AT4G25130.1 | Thale cress | plastid | 59.39 | 52.71 |
| AT2G18030.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 28.82 | 25.98 |
Protein Annotations
| Gene3D:3.30.1060.10 | MapMan:50.1.8 | EntrezGene:836286 | UniProt:A0A1P8BF28 | ProteinID:AED97500.1 | EMBL:AK227434 |
| ProteinID:ANM70208.1 | ArrayExpress:AT5G61640 | EnsemblPlantsGene:AT5G61640 | RefSeq:AT5G61640 | TAIR:AT5G61640 | RefSeq:AT5G61640-TAIR-G |
| EnsemblPlants:AT5G61640.2 | Unigene:At.29091 | ProteinID:BAB09008.1 | EMBL:BT005850 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008113 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 | InterPro:IPR036509 | HAMAP:MF_01401 |
| InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | RefSeq:NP_001331838.1 | RefSeq:NP_568937.1 | PFAM:PF01625 | Symbol:PMSR1 |
| PANTHER:PTHR42799 | PANTHER:PTHR42799:SF9 | SUPFAM:SSF55068 | SignalP:SignalP-noTM | TIGRFAMs:TIGR00401 | UniParc:UPI000848AD72 |
Description
PMSR1peptidemethionine sulfoxide reductase 1 [Source:TAIR;Acc:AT5G61640]
Coordinates
chr5:+:24774980..24776390
Molecular Weight (calculated)
26186.8 Da
IEP (calculated)
8.118
GRAVY (calculated)
-0.641
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRRISRRFL FTTFLCFSVS LSLQNFSMNI LNKLGIGSSR QTNMDPSPIA QVIDDEAPAP GNQFTQFGAG CFWSVELAYQ RVPGVTQTEV GYSQGITHDP
101: SYKDVCSGTT NHAEIVRVQY DPKECSYQSL LDLFWSKHDP TTLNRQGNDV GTQYRSGIYF YNPEQEKLAR ESLERHQQQV DRKVVTEILP AKKFYRAEEH
201: HQQYLSKGGR FGLKQSTEKG CNDPIRCYG
101: SYKDVCSGTT NHAEIVRVQY DPKECSYQSL LDLFWSKHDP TTLNRQGNDV GTQYRSGIYF YNPEQEKLAR ESLERHQQQV DRKVVTEILP AKKFYRAEEH
201: HQQYLSKGGR FGLKQSTEKG CNDPIRCYG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.