Factsheet for AT5G07460.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65235	Canola	nucleus	79.36	84.8
CDX78293	Canola	nucleus	83.03	81.9
CDX81052	Canola	cytosol, mitochondrion, nucleus	82.11	81.0
Bra009261.1-P	Field mustard	nucleus	73.85	78.92
CDX70041	Canola	nucleus	73.85	78.92
Bra040258.1-P	Field mustard	nucleus	17.89	72.22
Bra005936.1-P	Field mustard	cytosol	83.03	68.82
AT5G07470.1	Thale cress	cytosol	62.84	67.82
KRH46170	Soybean	nucleus	60.55	65.02
Bra016336.1-P	Field mustard	cytosol, nucleus, plastid	20.64	59.21
CDY41436	Canola	cytosol, nucleus, plastid	20.64	59.21
AT5G61640.2	Thale cress	plasma membrane	61.01	58.08
KRH14408	Soybean	nucleus	65.6	53.76
KRH73738	Soybean	nucleus	65.14	53.38
AT4G25130.1	Thale cress	plastid	61.01	51.55
KRG98772	Soybean	cytosol, plastid	60.55	49.44
AT2G18030.1	Thale cress	endoplasmic reticulum, golgi, vacuole	31.19	26.77

Protein Annotations

Gene3D:3.30.1060.10	MapMan:50.1.8	EntrezGene:830637	UniProt:A0A178UBC0	ProteinID:AED91161.1	ArrayExpress:AT5G07460
EnsemblPlantsGene:AT5G07460	RefSeq:AT5G07460	TAIR:AT5G07460	RefSeq:AT5G07460-TAIR-G	EnsemblPlants:AT5G07460.1	TAIR:AT5G07460.1
EMBL:BT010708	EMBL:BT012426	ProteinID:CAB87935.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006464	GO:GO:0006950
GO:GO:0006979	GO:GO:0008113	GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009987
GO:GO:0016491	GO:GO:0019538	GO:GO:0033744	GO:GO:0034599	GO:GO:0055114	GO:GO:0080167
InterPro:IPR036509	HAMAP:MF_01401	InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf	RefSeq:NP_196363.1	ProteinID:OAO89971.1
PFAM:PF01625	Symbol:PMSR2	PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293
PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064
PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611
PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010
PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046
PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137
PO:PO:0025022	PANTHER:PTHR42799	PANTHER:PTHR42799:SF9	UniProt:Q9LY15	SUPFAM:SSF55068	TIGRFAMs:TIGR00401
UniParc:UPI00000AA3EE	:	:	:	:	:

Description

MRSA2PMSR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UBC0]

Coordinates

chr5:-:2360630..2362228

Molecular Weight (calculated)

24435.6 Da

IEP (calculated)

4.867

GRAVY (calculated)

-0.663

Length

218 amino acids

Sequence
(BLAST)

001: MDSSLKTQEP QVVETSPSPV AQEPPQVADK PAIVPSPIAQ EPDNDVPAPG NEFAEFAAGC FWGVELAFQR IPGVTVTEVG YTHGISHNPS YEDVCTNTTN
101: HAEVVRVQYD PKECTYETLL DLFWSRHNPT TLNRQGELLG AQYRSGIYFY TPEQEKLARE SLEKEQKKLE DKIVTEILPA KKFYKAEEYH QQYLVKGGMH
201: GNAQSPAKSC KDPIRCYG

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.