Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- endoplasmic reticulum 4
- extracellular 3
- vacuole 4
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037241.1-P | Field mustard | vacuole | 73.62 | 74.8 |
| CDY30332 | Canola | vacuole | 72.44 | 73.6 |
| CDY54549 | Canola | vacuole | 72.44 | 73.6 |
| VIT_04s0023g03200.t01 | Wine grape | golgi | 65.75 | 66.27 |
| Solyc02g084030.2.1 | Tomato | nucleus | 63.78 | 64.29 |
| KRH69798 | Soybean | endoplasmic reticulum | 62.2 | 63.2 |
| TraesCS7D01G074700.1 | Wheat | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 58.27 | 61.67 |
| KRH08095 | Soybean | endoplasmic reticulum | 60.63 | 61.6 |
| TraesCS4A01G378100.1 | Wheat | endoplasmic reticulum, golgi | 60.24 | 61.45 |
| GSMUA_Achr1P08910_001 | Banana | endoplasmic reticulum, golgi | 59.45 | 60.89 |
| Zm00001d045418_P001 | Maize | mitochondrion | 58.27 | 60.66 |
| TraesCS7A01G081100.1 | Wheat | endoplasmic reticulum, golgi | 59.06 | 60.48 |
| EER89155 | Sorghum | endoplasmic reticulum, golgi | 58.27 | 58.96 |
| PGSC0003DMT400009346 | Potato | endoplasmic reticulum | 63.39 | 57.91 |
| Os06t0138100-01 | Rice | golgi | 57.87 | 57.87 |
| HORVU7Hr1G018320.4 | Barley | plastid | 59.84 | 54.68 |
| AT5G07470.1 | Thale cress | cytosol | 26.77 | 33.66 |
| AT5G07460.1 | Thale cress | cytosol | 26.77 | 31.19 |
| AT5G61640.2 | Thale cress | plasma membrane | 25.98 | 28.82 |
| AT4G25130.1 | Thale cress | plastid | 26.38 | 25.97 |
Protein Annotations
| Gene3D:3.30.1060.10 | MapMan:50.1.8 | EntrezGene:816315 | UniProt:A0A178W246 | ProteinID:AAD20123.1 | ProteinID:AEC06717.1 |
| ProteinID:AEC06718.1 | EMBL:AK227376 | ArrayExpress:AT2G18030 | EnsemblPlantsGene:AT2G18030 | RefSeq:AT2G18030 | TAIR:AT2G18030 |
| RefSeq:AT2G18030-TAIR-G | EnsemblPlants:AT2G18030.1 | TAIR:AT2G18030.1 | Unigene:At.27637 | EMBL:BT003071 | EMBL:BX819229 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | InterPro:IPR036509 | HAMAP:MF_01401 | InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | RefSeq:NP_179394.1 |
| RefSeq:NP_973483.1 | ProteinID:OAP11192.1 | PFAM:PF01625 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF3 | UniProt:Q9SL43 |
| SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | TMHMM:TMhelix | UniParc:UPI000000BEC7 | SEG:seg | : |
Description
MSRA5Peptide methionine sulfoxide reductase A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL43]
Coordinates
chr2:+:7840037..7841823
Molecular Weight (calculated)
28929.4 Da
IEP (calculated)
8.313
GRAVY (calculated)
-0.319
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MAISLKRNRF FIPYTNLVFF FFLCVSLLDK TVSIRISNQI SDTVVDSPDR PLKSAVFALG SFWRSEAAFG CINGVVRTSA GYAGGTKTNP EYRNLGDHAE
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.