Factsheet for VIT_04s0023g03200.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 3
nucleus 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g084030.2.1	Tomato	nucleus	69.05	69.05
AT2G18030.1	Thale cress	endoplasmic reticulum, golgi, vacuole	66.27	65.75
KRH69798	Soybean	endoplasmic reticulum	63.89	64.4
KRH08095	Soybean	endoplasmic reticulum	63.49	64.0
GSMUA_Achr1P08910_001	Banana	endoplasmic reticulum, golgi	61.9	62.9
TraesCS7D01G074700.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	59.52	62.5
Bra037241.1-P	Field mustard	vacuole	61.51	62.0
CDY30332	Canola	vacuole	61.51	62.0
CDY54549	Canola	vacuole	61.51	62.0
Zm00001d045418_P001	Maize	mitochondrion	59.13	61.07
TraesCS4A01G378100.1	Wheat	endoplasmic reticulum, golgi	60.32	61.04
TraesCS7A01G081100.1	Wheat	endoplasmic reticulum, golgi	59.92	60.89
PGSC0003DMT400009346	Potato	endoplasmic reticulum	67.06	60.79
EER89155	Sorghum	endoplasmic reticulum, golgi	60.32	60.56
Os06t0138100-01	Rice	golgi	60.32	59.84
HORVU7Hr1G018320.4	Barley	plastid	59.92	54.32
VIT_17s0000g09780.t01	Wine grape	cytosol	21.43	28.42
VIT_16s0013g00620.t01	Wine grape	nucleus	22.62	27.67
VIT_14s0006g02610.t01	Wine grape	cytosol	24.21	23.83
VIT_03s0088g00730.t01	Wine grape	cytosol	5.16	20.31

Protein Annotations

EntrezGene:100241959	wikigene:100241959	Gene3D:3.30.1060.10	MapMan:50.1.8	ProteinID:CBI17391	ProteinID:CBI17391.3
UniProt:D7SP12	EMBL:FN594959	GO:GO:0003674	GO:GO:0003824	GO:GO:0008113	GO:GO:0008150
GO:GO:0008152	GO:GO:0055114	InterPro:IPR036509	EntrezGene:LOC100241959	wikigene:LOC100241959	HAMAP:MF_01401
InterPro:Met_Sox_Rdtase_MsrA	InterPro:Met_Sox_Rdtase_MsrA_sf	PFAM:PF01625	PANTHER:PTHR42799	PANTHER:PTHR42799:SF3	SUPFAM:SSF55068
TIGR:TC64215	TIGRFAMs:TIGR00401	UniParc:UPI00015CB556	ArrayExpress:VIT_04s0023g03200	EnsemblPlantsGene:VIT_04s0023g03200	EnsemblPlants:VIT_04s0023g03200.t01
RefSeq:XP_002269473	RefSeq:XP_002269473.1	:	:	:	:

Description

No Description!

Coordinates

chr4:-:19753030..19760800

Molecular Weight (calculated)

28299.9 Da

IEP (calculated)

8.621

GRAVY (calculated)

-0.255

Length

252 amino acids

Sequence
(BLAST)

001: MTFSGRHVSL PYSRIICSVV LIILTAERAV SIRFPDRISE SVKASSNQPL KTAVFALGSF WRSEAVFGCL DGVVRTTAGY AGGSKANPEY RSWGDHAESV
101: QIEYNPRLIT FRQLLEVFWS SHDSRQVFGQ GPDVGNQYRS IIFTNGTEEL RLAAVSKERE QTVSKSSIVT TQIQQLGKFC PAEPEHQKFE LKRNPFLIQL
201: MGNLPEEELE KSTLAAKLNG FAAELCPPKV QQQINARIEE IIRKGWPILR EV

Best Arabidopsis Sequence Match ( AT2G18030.1 )
(BLAST)

001: MAISLKRNRF FIPYTNLVFF FFLCVSLLDK TVSIRISNQI SDTVVDSPDR PLKSAVFALG SFWRSEAAFG CINGVVRTSA GYAGGTKTNP EYRNLGDHAE
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI

Arabidopsis Description

MSRA5Peptide methionine sulfoxide reductase A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL43]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.