Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400026994 | Potato | cytosol | 58.2 | 57.31 |
| Solyc02g063250.2.1 | Tomato | cytosol | 58.2 | 56.65 |
| VIT_17s0000g09780.t01 | Wine grape | cytosol | 25.39 | 34.21 |
| VIT_16s0013g00620.t01 | Wine grape | nucleus | 27.34 | 33.98 |
| VIT_03s0088g00730.t01 | Wine grape | cytosol | 6.25 | 25.0 |
| VIT_04s0023g03200.t01 | Wine grape | golgi | 23.83 | 24.21 |
Protein Annotations
| Gene3D:3.30.1060.10 | MapMan:50.1.8 | ProteinID:CCB57697 | ProteinID:CCB57697.1 | UniProt:F6HSQ6 | EMBL:FN596245 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 |
| InterPro:IPR036509 | HAMAP:MF_01401 | InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PFAM:PF01625 | PANTHER:PTHR42799 |
| PANTHER:PTHR42799:SF2 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | UniParc:UPI00021085BA | ArrayExpress:VIT_14s0006g02610 | EnsemblPlantsGene:VIT_14s0006g02610 |
| EnsemblPlants:VIT_14s0006g02610.t01 | : | : | : | : | : |
Description
No Description!
Coordinates
chr14:-:20464218..20465903
Molecular Weight (calculated)
29136.8 Da
IEP (calculated)
7.440
GRAVY (calculated)
-0.400
Length
256 amino acids
Sequence
(BLAST)
(BLAST)
001: MYKILPKTHT DGSEFPISES TSRATIPLEF LCEAVFAGDG FWGLEAAFGR VDGVVKTATG YCGGTLKKPS YKEVCEGRTG HTEAVKVMYD KRKISYKSLC
101: DAFWEAHDPT NKEFLNFGLS THHRSAIFYV NEEQKKQAQE SKIRRQMKLN RRIVTKIIAL DSEFFVAENL HQKYYLQKSY RVCESLSLRS TEQFVESNIA
201: CKLNGILGME ARVIIDELTT FLGSHEVSSQ TKLACGEIIE DLRRNDGERI LKFCED
101: DAFWEAHDPT NKEFLNFGLS THHRSAIFYV NEEQKKQAQE SKIRRQMKLN RRIVTKIIAL DSEFFVAENL HQKYYLQKSY RVCESLSLRS TEQFVESNIA
201: CKLNGILGME ARVIIDELTT FLGSHEVSSQ TKLACGEIIE DLRRNDGERI LKFCED
001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
Arabidopsis Description
MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.