Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_03s0088g00730.t01 | Wine grape | cytosol | 26.84 | 79.69 |
| Solyc03g111720.2.1 | Tomato | extracellular, plastid | 79.47 | 77.04 |
| PGSC0003DMT400039382 | Potato | cytosol, nucleus, plastid | 77.37 | 75.38 |
| KRH63671 | Soybean | cytosol | 76.32 | 74.74 |
| GSMUA_Achr2P05990_001 | Banana | cytosol | 74.21 | 73.82 |
| VIT_16s0013g00620.t01 | Wine grape | nucleus | 65.26 | 60.19 |
| VIT_14s0006g02610.t01 | Wine grape | cytosol | 34.21 | 25.39 |
| VIT_04s0023g03200.t01 | Wine grape | golgi | 28.42 | 21.43 |
Protein Annotations
| EntrezGene:100255310 | wikigene:100255310 | Gene3D:3.30.1060.10 | MapMan:50.1.8 | ProteinID:CCB42914 | ProteinID:CCB42914.1 |
| ncoils:Coil | UniProt:F6GTP8 | EMBL:FN594950 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:IPR036509 | EntrezGene:LOC100255310 | wikigene:LOC100255310 |
| HAMAP:MF_01401 | InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PFAM:PF01625 | PANTHER:PTHR42799 | PANTHER:PTHR42799:SF1 |
| SUPFAM:SSF55068 | TIGR:TC52944 | TIGRFAMs:TIGR00401 | UniParc:UPI00015C86E6 | ArrayExpress:VIT_17s0000g09780 | EnsemblPlantsGene:VIT_17s0000g09780 |
| EnsemblPlants:VIT_17s0000g09780.t01 | RefSeq:XP_002278258 | RefSeq:XP_002278258.1 | RefSeq:XP_003634186 | RefSeq:XP_003634186.1 | : |
Description
No Description!
Coordinates
chr17:-:11635523..11636943
Molecular Weight (calculated)
21330.0 Da
IEP (calculated)
6.665
GRAVY (calculated)
-0.614
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MAANSTNPAL ERDPDRPDHP GLELAQFGAG CFWGVELAFQ RLVGVVKTEV GFSQGHVPDP TYKLVCTGTT NHVEVVRVQF DPDVCPYSNL LSLFWSRHDP
101: TSLNRQGADV GTQYRSGIYY YNEAQARLAR ESLEAKQKEL NDKNIVTEIL PAKRFYRAEE YHQQYLEKGG GKGLRQSAEK GCTDPIRCYG
101: TSLNRQGADV GTQYRSGIYY YNEAQARLAR ESLEAKQKEL NDKNIVTEIL PAKRFYRAEE YHQQYLEKGG GKGLRQSAEK GCTDPIRCYG
001: MFRRISRRFL FTTFLCFSVS LSLQNFSMNI LNKLGIGSSR QTNMDPSPIA QVIDDEAPAP GNQFTQFGAG CFWSVELAYQ RVPGVTQTEV GYSQGITHDP
101: SYKDVCSGTT NHAEIVRVQY DPKECSYQSL LDLFWSKHDP TTLNRQGNDV GTQYRSGIYF YNPEQEKLAR ESLERHQQQV DRKVVTEILP AKKFYRAEEH
201: HQQYLSKGGR FGLKQSTEKG CNDPIRCYG
101: SYKDVCSGTT NHAEIVRVQY DPKECSYQSL LDLFWSKHDP TTLNRQGNDV GTQYRSGIYF YNPEQEKLAR ESLERHQQQV DRKVVTEILP AKKFYRAEEH
201: HQQYLSKGGR FGLKQSTEKG CNDPIRCYG
Arabidopsis Description
PMSR1peptidemethionine sulfoxide reductase 1 [Source:TAIR;Acc:AT5G61640]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.