Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- cytosol 1
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g111720.2.1 | Tomato | extracellular, plastid | 92.31 | 91.84 |
| VIT_17s0000g09780.t01 | Wine grape | cytosol | 75.38 | 77.37 |
| KRH63671 | Soybean | cytosol | 71.28 | 71.65 |
| GSMUA_Achr2P05990_001 | Banana | cytosol | 69.23 | 70.68 |
| VIT_03s0088g00730.t01 | Wine grape | cytosol | 22.05 | 67.19 |
| PGSC0003DMT400054153 | Potato | cytosol | 57.44 | 54.9 |
| PGSC0003DMT400055589 | Potato | nucleus | 58.97 | 49.15 |
| PGSC0003DMT400009346 | Potato | endoplasmic reticulum | 30.26 | 21.22 |
| PGSC0003DMT400026994 | Potato | cytosol | 26.15 | 19.62 |
Protein Annotations
| EntrezGene:102601734 | Gene3D:3.30.1060.10 | MapMan:50.1.8 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:IPR036509 | UniProt:M1B873 | HAMAP:MF_01401 |
| InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PFAM:PF01625 | EnsemblPlantsGene:PGSC0003DMG400015228 | PGSC:PGSC0003DMG400015228 | EnsemblPlants:PGSC0003DMT400039382 |
| PANTHER:PTHR42799 | PANTHER:PTHR42799:SF1 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | UniParc:UPI0002967F76 | RefSeq:XP_006351441.1 |
| SEG:seg | : | : | : | : | : |
Description
Peptide methionine sulfoxide reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400015228]
Coordinates
chr3:+:51371303..51374965
Molecular Weight (calculated)
21601.0 Da
IEP (calculated)
5.028
GRAVY (calculated)
-0.655
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MGVNSSSKST TNPALDPDLD NPDQSDLEFA QFAAGCFWGV ELAFQRVGGV VKTEVGYSQG NVHDPNYNLI CSGKTEHAEV IRIQFDPNVC PYSNLLSLFW
101: SRHDPTTLNR QGNDVGKQYR SGIYYYNDAQ AQLARESLEA KQNELTDGNI VTEILPAKRF YRAEEYHQQY LEKGGGGGCK QSAAKGCNDP IKCYG
101: SRHDPTTLNR QGNDVGKQYR SGIYYYNDAQ AQLARESLEA KQNELTDGNI VTEILPAKRF YRAEEYHQQY LEKGGGGGCK QSAAKGCNDP IKCYG
001: MFRRISRRFL FTTFLCFSVS LSLQNFSMNI LNKLGIGSSR QTNMDPSPIA QVIDDEAPAP GNQFTQFGAG CFWSVELAYQ RVPGVTQTEV GYSQGITHDP
101: SYKDVCSGTT NHAEIVRVQY DPKECSYQSL LDLFWSKHDP TTLNRQGNDV GTQYRSGIYF YNPEQEKLAR ESLERHQQQV DRKVVTEILP AKKFYRAEEH
201: HQQYLSKGGR FGLKQSTEKG CNDPIRCYG
101: SYKDVCSGTT NHAEIVRVQY DPKECSYQSL LDLFWSKHDP TTLNRQGNDV GTQYRSGIYF YNPEQEKLAR ESLERHQQQV DRKVVTEILP AKKFYRAEEH
201: HQQYLSKGGR FGLKQSTEKG CNDPIRCYG
Arabidopsis Description
PMSR1peptidemethionine sulfoxide reductase 1 [Source:TAIR;Acc:AT5G61640]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.