Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- plastid 1
- extracellular 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc02g063250.2.1 | Tomato | cytosol | 84.23 | 83.27 |
| VIT_14s0006g02610.t01 | Wine grape | cytosol | 57.31 | 58.2 |
| PGSC0003DMT400054153 | Potato | cytosol | 25.0 | 31.86 |
| PGSC0003DMT400055589 | Potato | nucleus | 25.77 | 28.63 |
| PGSC0003DMT400039382 | Potato | cytosol, nucleus, plastid | 19.62 | 26.15 |
| PGSC0003DMT400009346 | Potato | endoplasmic reticulum | 22.69 | 21.22 |
Protein Annotations
| EntrezGene:102601813 | Gene3D:3.30.1060.10 | MapMan:50.1.8 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008113 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0055114 | InterPro:IPR036509 | UniProt:M1ANZ9 | HAMAP:MF_01401 |
| InterPro:Met_Sox_Rdtase_MsrA | InterPro:Met_Sox_Rdtase_MsrA_sf | PFAM:PF01625 | EnsemblPlantsGene:PGSC0003DMG400010414 | PGSC:PGSC0003DMG400010414 | EnsemblPlants:PGSC0003DMT400026994 |
| PANTHER:PTHR42799 | PANTHER:PTHR42799:SF2 | SUPFAM:SSF55068 | TIGRFAMs:TIGR00401 | UniParc:UPI000296B0C1 | RefSeq:XP_006346903.1 |
| SEG:seg | : | : | : | : | : |
Description
Peptide methionine sulfoxide reductase msrA [Source:PGSC_GENE;Acc:PGSC0003DMG400010414]
Coordinates
chr2:+:22086826..22089800
Molecular Weight (calculated)
29763.1 Da
IEP (calculated)
8.141
GRAVY (calculated)
-0.581
Length
260 amino acids
Sequence
(BLAST)
(BLAST)
001: MHYYKLLGRS KSHDSDNSDS ENTVNNNNNN IPAEFLCQAI FAGDSFYDVE AAYGRFEGVV RTATGYYGGT MRKPSYKDVS EGNTGHTEAV KITYDKRFVS
101: YKSLCDFFWD THDPTNKNSL NFGLSTHLRS AIFCSTEEER KQAQQSKIRR QMKLNRRILT KLSFLISNCE FFVAENQHQK YYLQKHYRLC ESLSLRSTEQ
201: FVESYIACKL NGVLALDGEL ILEKLPQLTR TCLLPKQCKS TCDEIIQDLK TTSAHGSTIS
101: YKSLCDFFWD THDPTNKNSL NFGLSTHLRS AIFCSTEEER KQAQQSKIRR QMKLNRRILT KLSFLISNCE FFVAENQHQK YYLQKHYRLC ESLSLRSTEQ
201: FVESYIACKL NGVLALDGEL ILEKLPQLTR TCLLPKQCKS TCDEIIQDLK TTSAHGSTIS
001: MQVLVVSPPL IAAASLSKPL NSLSKAALSF SRAKPICPFP QTSRRPISVY KSPMNNLFNR LGFGSRPQAQ ADPSSAAIAQ GPDDDVPSSG QQFAQFGAGC
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
101: FWGVELAYQR VPGVTKTEVG YSHGIVHNPS YEDVCTGTTG HNEVVRVQYD PKECSFESLL DVFWNRHDPT TLNRQGGDVG TQYRSGIYYY TDEQERIARE
201: AVEKQQKILN KRIVTEILPA TKFYRAENYH QQYLAKGGRM GLRQSAEKGC KDPIRCYG
Arabidopsis Description
MSR4Peptide methionine sulfoxide reductase A4, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P54150]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.