Factsheet for TraesCS4A01G378100.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, golgi
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G081100.1	Wheat	endoplasmic reticulum, golgi	87.95	88.31
TraesCS7D01G074700.1	Wheat	endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	83.94	87.08
HORVU7Hr1G018320.4	Barley	plastid	93.57	83.81
Zm00001d045418_P001	Maize	mitochondrion	75.9	77.46
EER89155	Sorghum	endoplasmic reticulum, golgi	75.9	75.3
Os06t0138100-01	Rice	golgi	76.71	75.2
GSMUA_Achr1P08910_001	Banana	endoplasmic reticulum, golgi	63.45	63.71
Solyc02g084030.2.1	Tomato	nucleus	61.04	60.32
VIT_04s0023g03200.t01	Wine grape	golgi	61.04	60.32
AT2G18030.1	Thale cress	endoplasmic reticulum, golgi, vacuole	61.45	60.24
KRH69798	Soybean	endoplasmic reticulum	59.44	59.2
KRH08095	Soybean	endoplasmic reticulum	58.63	58.4
Bra037241.1-P	Field mustard	vacuole	58.23	58.0
CDY54549	Canola	vacuole	57.43	57.2
CDY30332	Canola	vacuole	57.03	56.8
PGSC0003DMT400009346	Potato	endoplasmic reticulum	59.84	53.6
TraesCS2A01G323300.1	Wheat	cytosol	26.1	35.91
TraesCS1A01G217300.1	Wheat	golgi, plastid	27.31	26.05

Protein Annotations

EnsemblPlants:TraesCS4A01G378100.1	EnsemblPlantsGene:TraesCS4A01G378100	Gene3D:3.30.1060.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008113
GO:GO:0008150	GO:GO:0008152	GO:GO:0055114	HAMAP:MF_01401	InterPro:IPR036509	InterPro:Met_Sox_Rdtase_MsrA
InterPro:Met_Sox_Rdtase_MsrA_sf	ncoils:Coil	PANTHER:PTHR42799	PANTHER:PTHR42799:SF3	PFAM:PF01625	SEG:seg
SignalP:SignalP-noTM	SUPFAM:SSF55068	TIGRFAMs:TIGR00401	TMHMM:TMhelix	MapMan:50.1.8	:

Description

No Description!

Coordinates

chr4A:-:655259075..655260655

Molecular Weight (calculated)

26947.3 Da

IEP (calculated)

9.365

GRAVY (calculated)

-0.167

Length

249 amino acids

Sequence
(BLAST)

001: MARASSPAAA AFLCALAFLL ATAASGARLT VRAGGEGLTV RAGGGAPATA VFALGSFWRS EAAFGCLHGV LRTSVGYAGG SKANPEYRNL ADHAECVKVE
101: YDPRQIQYKQ LLDVFWASHD PREVFGQGPD VGNQYRSVIF TNGTLEARLA ALTKEREQAK DRSSVITTKI QPLGAFYPAE PEHQKFELKR KPFLVQLIGN
201: LPEEELLSST LAAKLNAYAA ELCPPKTQRK ISSKIDEIAK KGWPILRDI

Best Arabidopsis Sequence Match ( AT2G18030.1 )
(BLAST)

001: MAISLKRNRF FIPYTNLVFF FFLCVSLLDK TVSIRISNQI SDTVVDSPDR PLKSAVFALG SFWRSEAAFG CINGVVRTSA GYAGGTKTNP EYRNLGDHAE
101: SVQVEYDPRI IGYRQLLDVF WSSHDSRQVF GQGPDVGNQY RSCIFTNSTE ELRLASTSKE REQLNTRSSI VTTQIQQLGT FYRAEPDHQK FELKQHPFLI
201: QLIGNMVEEE LERSALATKL NGYAAELCPP RIQKHIDSRV NEIIRKGWPV LRDI

Arabidopsis Description

MSRA5Peptide methionine sulfoxide reductase A5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SL43]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.