Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- plastid 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY24127 | Canola | cytosol | 89.86 | 97.64 |
| AT4G12170.1 | Thale cress | extracellular | 39.13 | 35.29 |
| Bra001592.1-P | Field mustard | extracellular, plasma membrane | 27.54 | 23.31 |
| Bra027250.1-P | Field mustard | plastid | 26.09 | 18.75 |
| Bra034214.1-P | Field mustard | plastid | 23.91 | 17.93 |
| Bra000821.1-P | Field mustard | plastid | 23.19 | 17.78 |
| Bra015223.1-P | Field mustard | plastid | 18.84 | 15.2 |
| Bra018842.1-P | Field mustard | plastid | 18.84 | 14.29 |
| Bra015721.1-P | Field mustard | plastid | 17.39 | 13.95 |
| Bra032547.1-P | Field mustard | plastid | 23.19 | 9.55 |
Protein Annotations
| Gene3D:3.40.30.10 | MapMan:35.2 | EnsemblPlantsGene:Bra019005 | EnsemblPlants:Bra019005.1 | EnsemblPlants:Bra019005.1-P | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | InterPro:IPR013766 |
| UniProt:M4DR62 | PFAM:PF00085 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF360 | SUPFAM:SSF52833 | InterPro:Thioredoxin |
| InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_domain | UniParc:UPI000253E80D | : | : | : |
Description
AT4G12170 (E=6e-018) | thioredoxin family protein
Coordinates
chrA06:+:788986..789561
Molecular Weight (calculated)
15520.0 Da
IEP (calculated)
4.439
GRAVY (calculated)
0.284
Length
138 amino acids
Sequence
(BLAST)
(BLAST)
001: MCFVCLGLSV GMCSESDALI KTYVSSTLHS DDLLIHEVPK SDWDSLVMES KAPVMVLFTA YLCPTCFIMS FNMDTLDLKF AGRFKFYSVD LDDEPEIGAR
101: WGVLTCPTTV VFKLGKVMDK RTGFLNEATQ MDIVEKYI
101: WGVLTCPTTV VFKLGKVMDK RTGFLNEATQ MDIVEKYI
001: MEQIRGLYHL VVTVTCLVCL GFNVSMCSGS DSDPFIKAYV SSSLPSHDGL VQSLSASEWN SLVIQSKVPV IVVFIAKDCA ECGSLMPELE FLDSEYEYML
101: KFYTVDTDEE LELAKDYRIE YHPITIVFKG GEEKERVLGY YPQMLGQLAN KYL
101: KFYTVDTDEE LELAKDYRIE YHPITIVFKG GEEKERVLGY YPQMLGQLAN KYL
Arabidopsis Description
Thioredoxin superfamily protein [Source:TAIR;Acc:AT4G12170]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.