Factsheet for GSMUA_Achr5P02870_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	95.13	95.13
Os03t0794500-01	Rice	mitochondrion	90.75	90.75
OQU90838	Sorghum	cytosol, mitochondrion	90.51	90.51
Zm00001d034420_P002	Maize	plasma membrane	90.27	90.27
TraesCS5A01G434100.1	Wheat	cytosol, mitochondrion	89.54	89.54
HORVU4Hr1G061100.1	Barley	cytosol	16.06	89.19
Solyc10g078550.1.1	Tomato	extracellular	86.86	86.86
PGSC0003DMT400021552	Potato	cytosol, mitochondrion	86.86	86.86
KRH06711	Soybean	cytosol, mitochondrion	86.13	86.13
KRG94812	Soybean	cytosol, mitochondrion	86.13	86.13
CDY25453	Canola	cytosol, mitochondrion	85.64	85.64
AT5G18170.1	Thale cress	cytosol, mitochondrion	85.4	85.4
AT3G03910.1	Thale cress	cytosol, mitochondrion	85.4	85.4
Bra036428.1-P	Field mustard	cytosol, mitochondrion	85.16	85.16
Bra002139.1-P	Field mustard	mitochondrion	85.16	85.16
CDY21157	Canola	cytosol, mitochondrion	85.16	85.16
CDY38492	Canola	mitochondrion	84.91	84.91
CDY29969	Canola	cytosol, mitochondrion	84.91	84.91
KRH08494	Soybean	mitochondrion	84.91	84.91
KRH70158	Soybean	extracellular, mitochondrion	84.43	84.43
TraesCS5D01G442000.1	Wheat	mitochondrion, plastid	89.54	80.7
TraesCS5B01G437100.2	Wheat	extracellular	89.29	80.31
GSMUA_Achr2P10430_001	Banana	mitochondrion	79.56	79.56
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	89.54	76.51
KRG88968	Soybean	cytosol	38.93	75.83
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	37.23	75.37
CDY64896	Canola	mitochondrion	83.21	74.84
TraesCS7D01G412300.1	Wheat	cytosol	29.68	72.19
TraesCS1B01G166200.2	Wheat	cytosol	22.14	67.91
TraesCS1D01G322800.1	Wheat	cytosol	11.68	64.0
TraesCS5D01G021500.1	Wheat	cytosol	18.73	57.04
TraesCS1D01G080500.1	Wheat	cytosol	14.84	56.48
Bra031964.1-P	Field mustard	mitochondrion	75.91	55.12
TraesCS6D01G031800.1	Wheat	cytosol	14.36	54.63
TraesCS1B01G472700.1	Wheat	cytosol	17.27	52.59
CDY50862	Canola	cytosol, mitochondrion, plastid	82.48	51.99
TraesCS7B01G165800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.17	39.37
TraesCS7B01G339000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	22.87	30.03
GSMUA_AchrUn_...	Banana	cytosol	24.82	22.77
GSMUA_AchrUn_...	Banana	nucleus	8.52	18.72
GSMUA_Achr8P05390_001	Banana	cytosol	25.55	17.27

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639	GO:GO:0055114
EnsemblPlantsGene:GSMUA_Achr5G02870_001	EnsemblPlants:GSMUA_Achr5P02870_001	EnsemblPlants:GSMUA_Achr5T02870_001	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_AS	InterPro:Glu/Leu/Phe/Val_DH_C
InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:Glu_DH	UniProt:M0SV66	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH	PFAM:PF00208
PFAM:PF02812	PIRSF:PIRSF000185	PRINTS:PR00082	ScanProsite:PS00074	PANTHER:PTHR11606	PANTHER:PTHR11606:SF18
SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI000294DB57	:	:

Description

Glutamate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr5G02870_001]

Coordinates

chr5:-:1913844..1920372

Molecular Weight (calculated)

44478.4 Da

IEP (calculated)

5.867

GRAVY (calculated)

-0.116

Length

411 amino acids

Sequence
(BLAST)

001: MNALVATSRN FKQAAKLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHHEVDPDEV NALAQLMTWK TAVANIPYGG
101: AKGGIGCSPG ELSRSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNPQTM AWILDEYSKF HGYSPAVVTG KPVDLGGSLG REAATGRGVL FATEALLAEY
201: GKSIKDQRFV IQGFGNVGSW AAQLISAAGG KVIAVSDVTG AIKNNEGLDI EKLLKHSVEN LGIIGFSGGE SIDPSSLLTE DCDVLIPAAL GGVINRENAN
301: DIMAKFIIEA ANHPTDPEAD EILSKKGVVI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNAELKTYM TRGFKDMKEM CRAHNCDLRM GAFTLGVNRV
401: ARATVLRGWE A

Best Arabidopsis Sequence Match ( AT5G18170.1 )
(BLAST)

001: MNALAATNRN FKLAARLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS KLSISELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGYSPAVVTG KPIDLGGSLG RDAATGRGVM FGTEALLNEH
201: GKTISGQRFV IQGFGNVGSW AAKLISEKGG KIVAVSDITG AIKNKDGIDI PALLKHTKEH RGVKGFDGAD PIDPNSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEA ANHPTDPDAD EILSKKGVVI LPDIYANSGG VTVSYFEWVQ NIQGFMWEEE KVNDELKTYM TRSFKDLKEM CKTHSCDLRM GAFTLGVNRV
401: AQATILRGWG A

Arabidopsis Description

GDH1Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEK9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.