Factsheet for Bra031964.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra036428.1-P	Field mustard	cytosol, mitochondrion	62.54	86.13
AT3G03910.1	Thale cress	cytosol, mitochondrion	61.48	84.67
HORVU4Hr1G061100.1	Barley	cytosol	10.95	83.78
Bra002139.1-P	Field mustard	mitochondrion	59.19	81.51
CDY50862	Canola	cytosol, mitochondrion, plastid	91.34	79.29
PGSC0003DMT400021552	Potato	cytosol, mitochondrion	57.42	79.08
KRG94812	Soybean	cytosol, mitochondrion	57.24	78.83
KRH06711	Soybean	cytosol, mitochondrion	57.24	78.83
Solyc10g078550.1.1	Tomato	extracellular	56.89	78.35
KRH70158	Soybean	extracellular, mitochondrion	56.36	77.62
KRH08494	Soybean	mitochondrion	56.18	77.37
KRG88968	Soybean	cytosol	28.45	76.3
Os03t0794500-01	Rice	mitochondrion	55.12	75.91
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	55.12	75.91
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	55.12	75.91
TraesCS5A01G434100.1	Wheat	cytosol, mitochondrion	54.59	75.18
OQU90838	Sorghum	cytosol, mitochondrion	54.24	74.7
Bra009263.1-P	Field mustard	mitochondrion	51.41	70.8
Bra028697.1-P	Field mustard	mitochondrion	51.06	70.32
Bra005935.1-P	Field mustard	mitochondrion	50.71	69.83
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	57.95	68.19
TraesCS5D01G442000.1	Wheat	mitochondrion, plastid	54.59	67.76
TraesCS5B01G437100.2	Wheat	extracellular	54.59	67.61
TraesCS1D01G322800.1	Wheat	cytosol	7.6	57.33
TraesCS7D01G412300.1	Wheat	cytosol	16.43	55.03
TraesCS1D01G080500.1	Wheat	cytosol	9.89	51.85
TraesCS6D01G031800.1	Wheat	cytosol	9.72	50.93
TraesCS1B01G166200.2	Wheat	cytosol	11.84	50.0
TraesCS5D01G021500.1	Wheat	cytosol	10.6	44.44
TraesCS1B01G472700.1	Wheat	cytosol	8.66	36.3
TraesCS7B01G165800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	7.95	35.43
TraesCS7B01G339000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	14.13	25.56
Zm00001d016419_P001	Maize	mitochondrion, plastid	9.72	25.35
Bra018927.1-P	Field mustard	cytosol	17.14	15.3
Bra014299.1-P	Field mustard	cytosol	17.14	14.99

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra031964	EnsemblPlants:Bra031964.1	EnsemblPlants:Bra031964.1-P
InterPro:F-box-assoc_dom_typ3	InterPro:F-box-assoc_interact_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH
InterPro:Glu/Leu/Phe/Val_DH_AS	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	UniProt:M4ET34	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH
PFAM:PF00208	PFAM:PF02812	PFAM:PF08268	PRINTS:PR00082	ScanProsite:PS00074	PANTHER:PTHR11606
PANTHER:PTHR11606:SF18	SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	TIGRFAMs:TIGR01640	UniParc:UPI0002546519
SEG:seg	:	:	:	:	:

Description

AT3G03910 (E=4e-171) GDH3 | GDH3 (GLUTAMATE DEHYDROGENASE 3); binding / catalytic/ oxidoreductase/ oxidoreductase, acting on the CH-NH2 group of donors, NAD or NADP as acceptor

Coordinates

chrA02:+:26893569..26896912

Molecular Weight (calculated)

61792.8 Da

IEP (calculated)

6.134

GRAVY (calculated)

-0.230

Length

566 amino acids

Sequence
(BLAST)

001: MAITKTRNFK LASRLLGLDS KLEQSLLIPF REIKVECTIP KDDGTLASFV GFRVQHDNAR GPMKGGIRYH PEVEPDEVNA LAQLMTWKTA VAKIPYGGAK
101: GGIGCDPTEL SISELERLTR VFTQKIHDLI GIHTDVPAPD MGTGPQTMAW ILDEYSKFHG HSPAIVTGKP IDLGGSLGRD AATGRGVLFA TEALLNEHGK
201: SIAGQRFAIQ GFGNVGSWTA KLINEKGGKI VAVSDVTGAI KNKDGINISG LLEHTEENIG VKGFDGADAI DADSVLVEDC DILIPAALGG VIHRENANEI
301: KAKFIIEGAN HPTDPEADET KWVQNIQGFM WDEEKVNKEL KSYMTRGFKD LKEMCKTHSC DLRMGAFSLG VNRVAQATTG RRPSASSAPA PWPKSWRSLD
401: ALSYTPVTHS VCINGVLHFG AQSFVDPNKY KVVTFNLGSE RFGLIDLPDE LQINPVVDRL VKYRGTACLV KYDNCFDLPN GKRVHRLFVK EENEDKLSPI
501: LVQIPGWRNV AGNLAFDFTG TTEEDEELVA VSSVGIDGYH YVIYFNSETE LLRKIKIDGG SSGATL

Best Arabidopsis Sequence Match ( AT3G03910.1 )
(BLAST)

001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRGFKDLKEM CQTHSCDLRM GAFTLGINRV
401: AQATTIRGWG S

Arabidopsis Description

GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.