Factsheet for Bra018927.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22863	Canola	cytosol	99.68	99.68
AT1G51720.1	Thale cress	cytosol	96.69	96.23
Bra014299.1-P	Field mustard	cytosol	96.37	94.44
VIT_09s0002g02530.t01	Wine grape	cytosol	83.75	83.62
KRH44203	Soybean	nucleus	79.97	79.59
KRH47165	Soybean	nucleus	79.5	79.12
PGSC0003DMT400017579	Potato	cytosol	76.97	78.58
Solyc01g068210.2.1	Tomato	nucleus	77.92	77.92
GSMUA_AchrUn_...	Banana	cytosol	51.1	72.32
GSMUA_Achr8P05390_001	Banana	cytosol	67.19	70.07
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.56	69.92
KRH38711	Soybean	endoplasmic reticulum	20.03	67.2
EES00914	Sorghum	cytosol	66.4	64.77
TraesCS3A01G202500.1	Wheat	cytosol	64.67	63.08
TraesCS3D01G206100.4	Wheat	cytosol	64.51	63.02
TraesCS3B01G227100.1	Wheat	cytosol	63.88	62.79
Os01t0558200-01	Rice	mitochondrion	66.4	61.28
Zm00001d044503_P004	Maize	cytosol	66.25	57.3
HORVU3Hr1G048870.1	Barley	plastid	64.98	53.72
Bra028697.1-P	Field mustard	mitochondrion	17.82	27.49
Bra009263.1-P	Field mustard	mitochondrion	17.51	27.01
Bra036428.1-P	Field mustard	cytosol, mitochondrion	17.35	26.76
Bra005935.1-P	Field mustard	mitochondrion	17.35	26.76
Bra002139.1-P	Field mustard	mitochondrion	16.56	25.55
Bra031964.1-P	Field mustard	mitochondrion	15.3	17.14

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra018927	EnsemblPlants:Bra018927.1
EnsemblPlants:Bra018927.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom
UniProt:M4DQY4	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00208	PFAM:PF02812	PRINTS:PR00082	PANTHER:PTHR43571
SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI000253E97E	SEG:seg	:

Description

AT1G51720 (E=0.0) | glutamate dehydrogenase, putative

Coordinates

chrA06:-:1218945..1222404

Molecular Weight (calculated)

70704.2 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.421

Length

634 amino acids

Sequence
(BLAST)

001: MFGPTSGLGM NPSMDDMNLL QQAQRHQLVV SNLGEEIDLE IGPGEDEAAF ATSSLIREPS AGEHDETKHM VLVSDLPSED QDTSKGQTSA KRKKKVVKRW
101: REEWADTYKW AYVDMKDGTA RIFCSVCREY GRKHRRNPYG NEGSRNMQMS ALEEHNNSLL HKEALRLQTA SKEKIVVDKP IYVKTLMSKS AGSIVEGALK
201: RDPNEIEFIQ SVQECVHALE RVIAKNSHYV NIMERLLEPE RMIVFRVPWI DDRGETHVNR GFRVQFNQAL GPCRGGIRFH PSMNLSIAKF LGFQQTLKNA
301: LSPYKLGGAS GGSDFDPKGR SDNEIMRFCQ SFMNEMYRYM GPDKDLPSEE AGVGTREMGY LFGQYRRLAG QFQGSFTGPR IYWAASSLRT EASGYGVVYF
401: ARLMLADMNK EIKGLRCVVS GCGKIAMHVV EKLIACGAHP VTVSDSKGYL VDDDGFDYMK LAFLREIKSQ QRSLRDYSKT YARAKYFDEV KPWNERCDVA
501: FPCASQNEVD QADAINLVNA GCRLLVEGSN MPCTAEAVDV FRKANVLIAP AIAAGAGGVA AGEIEVLRES NSMQWSAEDF ESSLQEALKQ TYEKALKAAN
601: DFGYQKESPE ALLHGATIAA FLNIAQAMTD QGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.