Factsheet for VIT_09s0002g02530.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH44203	Soybean	nucleus	88.66	88.38
KRH47165	Soybean	nucleus	88.19	87.91
PGSC0003DMT400017579	Potato	cytosol	85.04	86.96
Solyc01g068210.2.1	Tomato	nucleus	86.46	86.59
CDY46542	Canola	cytosol	76.54	86.02
CDY52956	Canola	cytosol	76.22	85.66
CDY33875	Canola	cytosol	82.68	84.54
AT1G51720.1	Thale cress	cytosol	84.25	83.99
Bra018927.1-P	Field mustard	cytosol	83.62	83.75
CDY22863	Canola	cytosol	83.31	83.44
CDY18551	Canola	cytosol	43.46	82.39
Bra014299.1-P	Field mustard	cytosol	83.78	82.23
KRH38711	Soybean	endoplasmic reticulum	23.78	79.89
GSMUA_AchrUn_...	Banana	cytosol	54.65	77.46
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.8	76.42
GSMUA_Achr8P05390_001	Banana	cytosol	72.13	75.33
EES00914	Sorghum	cytosol	68.82	67.23
TraesCS3A01G202500.1	Wheat	cytosol	68.5	66.92
TraesCS3D01G206100.4	Wheat	cytosol	68.35	66.87
TraesCS3B01G227100.1	Wheat	cytosol	67.56	66.51
Os01t0558200-01	Rice	mitochondrion	70.24	64.92
Zm00001d044503_P004	Maize	cytosol	68.5	59.35
HORVU3Hr1G048870.1	Barley	plastid	68.5	56.71
VIT_16s0039g02750.t01	Wine grape	cytosol	18.58	28.71
VIT_16s0039g02720.t01	Wine grape	mitochondrion	18.27	28.22
VIT_00s0204g00150.t01	Wine grape	cytosol, mitochondrion, plastid	7.4	26.7
VIT_00s1491g00010.t01	Wine grape	cytosol, mitochondrion	9.45	25.0
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	17.48	23.08
VIT_16s0039g02740.t01	Wine grape	cytosol, mitochondrion	14.96	23.06
VIT_00s0204g00160.t01	Wine grape	cytosol	2.83	19.15

Protein Annotations

Gene3D:1.10.285.10	EntrezGene:100244689	wikigene:100244689	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720
ProteinID:CCB59360	ProteinID:CCB59360.1	UniProt:F6HY37	EMBL:FN596494	GO:GO:0003674	GO:GO:0003824
GO:GO:0004354	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006520	GO:GO:0006537	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	EntrezGene:LOC100244689
wikigene:LOC100244689	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00208	PFAM:PF02812	PRINTS:PR00082	PANTHER:PTHR43571
SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	TIGR:TC67121	UniParc:UPI0001983E06	ArrayExpress:VIT_09s0002g02530
EnsemblPlantsGene:VIT_09s0002g02530	EnsemblPlants:VIT_09s0002g02530.t01	unigene:Vvi.12825	RefSeq:XP_002281123	RefSeq:XP_002281123.1	RefSeq:XP_010654558.1
RefSeq:XP_010654559.1	RefSeq:XP_010654560.1	RefSeq:XP_019077801.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr9:+:2322516..2337428

Molecular Weight (calculated)

71089.9 Da

IEP (calculated)

6.516

GRAVY (calculated)

-0.426

Length

635 amino acids

Sequence
(BLAST)

001: MLLPVGGLGM NSTMDDMNLI QQRHHLVVRE LGEEIDLEIG PGDDDPSFAN TPLIGGPPRE PSAEEHDESK QVVMVSQLSS EDQDASKMQP VKRKKKVVKR
101: WREEWADTYK WAYVDVKEGT ARIFCSVCRE YGRKHRRNPY GNEGSRNMQM SALEEHNNSL LHKEALRLQM ASKDKIIVDK PIYVKALMSK TAGSIVEAAL
201: KRDPHEVEFI QSVQEAVHAL ERVIAKNSHY VNIMERLLEP ERMILFRVPW VDDRGETHVN RGFRVQFNQT LGPCRGGIRF HSSMNLSIAK FLGFEQTLKN
301: ALSPYKLGGA AGGSDFDPKG KSDNEIMRFC QSFMNELYRY LGPDQDLPSE EMGVGPREMG YLFGQYRRLA GHFQGSFTGP RIFWSGSSLR TEATGYGLVF
401: FAQLMLADMN KELKGLRCVV SGSGKIALHV TEKLLAYGAL PITVSDSKGY LVDEDGFDYM KISFLREIKS QQRSLRDYSK TYARSKYYDE AKPWSERCDV
501: AFPCASQNEI DQSDAINLVN SGCRILIEGS NMPCTPEAVD VLRKANVLIA PAMAAGAGGV AAGELELNHE CNLMHWSPED FESKLQEAMK QTYQRALKAA
601: ADFGYQKESP EALVHGAAIS AFLTIAQGMT DQGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.