CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	secretory
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH38711	Soybean	endoplasmic reticulum	65.04	42.33
KRH44203	Soybean	nucleus	81.3	15.7
KRH47165	Soybean	nucleus	80.49	15.54
CDY46542	Canola	cytosol	69.92	15.22
CDY52956	Canola	cytosol	69.92	15.22
VIT_09s0002g02530.t01	Wine grape	cytosol	76.42	14.8
GSMUA_AchrUn_...	Banana	cytosol	53.66	14.73
PGSC0003DMT400017579	Potato	cytosol	71.54	14.17
CDY33875	Canola	cytosol	69.92	13.85
Solyc01g068210.2.1	Tomato	nucleus	70.73	13.72
Bra018927.1-P	Field mustard	cytosol	69.92	13.56
CDY22863	Canola	cytosol	69.92	13.56
AT1G51720.1	Thale cress	cytosol	69.92	13.5
Bra014299.1-P	Field mustard	cytosol	69.92	13.29
GSMUA_Achr8P05390_001	Banana	cytosol	56.1	11.35
EES00914	Sorghum	cytosol	57.72	10.92
TraesCS3A01G202500.1	Wheat	cytosol	51.22	9.69
Zm00001d044503_P004	Maize	cytosol	57.72	9.69
TraesCS3B01G227100.1	Wheat	cytosol	50.41	9.61
TraesCS3D01G206100.4	Wheat	cytosol	50.41	9.55
Os01t0558200-01	Rice	mitochondrion	52.85	9.46
KRH70158	Soybean	extracellular, mitochondrion	28.46	8.52
KRH04228	Soybean	mitochondrion	28.46	8.5
KRH08494	Soybean	mitochondrion	27.64	8.27
KRH06711	Soybean	cytosol, mitochondrion	27.64	8.27
KRH77294	Soybean	mitochondrion	27.64	8.27
KRH57522	Soybean	mitochondrion	27.64	8.25
HORVU3Hr1G048870.1	Barley	plastid	51.22	8.21
KRG94812	Soybean	cytosol, mitochondrion	26.83	8.03
KRG88968	Soybean	cytosol	12.2	7.11
CDY18551	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.2	EMBL:ACUP02010275	EnsemblPlantsGene:GLYMA_16G203700	GO:GO:0003674	GO:GO:0003824
GO:GO:0004354	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006520	GO:GO:0006537	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH_C	UniProt:K7MIQ8	EnsemblPlants:KRH09218	ProteinID:KRH09218
ProteinID:KRH09218.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00208	PANTHER:PTHR43571	SUPFAM:SSF51735	UniParc:UPI0002953FDD

Description

hypothetical protein

Coordinates

chr16:-:36464668..36465760

Molecular Weight (calculated)

13773.7 Da

IEP (calculated)

9.059

GRAVY (calculated)

-0.112

Length

123 amino acids

Sequence
(BLAST)

001: MHVLQKLIAY GALSISVSDS IGYLVNEDGF DYMKISFLRG IKAQQRSLRD YSKTYARSRY YDEAKPWNER CDVAFAGCRI LVEGSNMPFT PEGVQILRKA
101: SVLIAPSMAA GAGGMRLWLE NLN

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.