CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 3
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044503_P004	Maize	cytosol	96.77	85.81
GSMUA_AchrUn_...	Banana	cytosol	53.23	77.23
TraesCS3B01G227100.1	Wheat	cytosol	75.54	76.12
TraesCS3D01G206100.4	Wheat	cytosol	76.0	76.12
TraesCS3A01G202500.1	Wheat	cytosol	76.0	76.0
GSMUA_Achr8P05390_001	Banana	cytosol	69.69	74.51
Os01t0558200-01	Rice	mitochondrion	78.62	74.38
CDY46542	Canola	cytosol	60.46	69.56
CDY52956	Canola	cytosol	60.46	69.56
VIT_09s0002g02530.t01	Wine grape	cytosol	67.23	68.82
CDY33875	Canola	cytosol	64.46	67.47
PGSC0003DMT400017579	Potato	cytosol	64.15	67.15
KRH44203	Soybean	nucleus	65.38	66.72
KRH47165	Soybean	nucleus	65.38	66.72
Bra018927.1-P	Field mustard	cytosol	64.77	66.4
CDY22863	Canola	cytosol	64.62	66.25
Solyc01g068210.2.1	Tomato	nucleus	64.0	65.62
AT1G51720.1	Thale cress	cytosol	64.15	65.46
HORVU3Hr1G048870.1	Barley	plastid	76.31	64.67
Bra014299.1-P	Field mustard	cytosol	64.15	64.45
KRH38711	Soybean	endoplasmic reticulum	18.15	62.43
CDY18551	Canola	cytosol	31.85	61.79
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.92	57.72
EES11206	Sorghum	mitochondrion	16.15	25.55
OQU90838	Sorghum	cytosol, mitochondrion	16.0	25.3

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	EntrezGene:8078593	UniProt:C5XN30
EnsemblPlants:EES00914	ProteinID:EES00914	ProteinID:EES00914.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004352
GO:GO:0004354	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0006520	GO:GO:0006537	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016491	GO:GO:0016639	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom
InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH	PFAM:PF00208	PFAM:PF02812	PRINTS:PR00082	PANTHER:PTHR43571
SMART:SM00839	EnsemblPlantsGene:SORBI_3003G188400	SUPFAM:SSF51735	SUPFAM:SSF53223	unigene:Sbi.20860	UniParc:UPI0001A84820
RefSeq:XP_002455794.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:50795712..50801094

Molecular Weight (calculated)

72731.0 Da

IEP (calculated)

6.760

GRAVY (calculated)

-0.372

Length

650 amino acids

Sequence
(BLAST)

001: MNSMDEINLL RQAQRQHQHH LMVRGIGEEI DLEIGPGDDP SFSGASLVAV TSTHDAVVHA DDHKSLLIPC SQTGAADGLA PQQQHLAQGE EEHDGMLRQP
101: SGHTKKKKKV VKKWREEWAD TYKWAYVAVH DNTTRIFCSV CKEYGRKHRR NPYGNEGSRN MQMSALEEHN NSLLHKEALR LQMASKEKLQ PPEIERPVYV
201: KALSKTAASI LECVLRRDPH EAEYIQSIQE VVHSLEPVLV KNTQYIQILE RLLEPERCFI FRVPWIDDRG EAHVNRGFRV QFSQALGPCR GGLRFHPSMS
301: LSVAKFLAFE HTLKNALSLY KLGGAAGGSD FDPKGKSDNE IMRFCQSFMD ELYRYLGPDQ DFPAEDIGVG PREMGYLFGQ YRRLSGHFQG NFTGPKIFWS
401: GSSFRTEATG YGLVFFARIL LAEMNKELKG LRCVISGSGK IAMHVLEKLL PCGAIPVTVS DSKGYLLDED GFDYMKYSLL RDIKAQQKSL KEYLKSYPHA
501: KYIDDAKPWS EQCDVAFPCA SHNEIDQGEA VAIINSGCRV LVECSNMPCT VQAVDILRKA KVIVAPAKAT AAGGVALGEL ELNPEFNLMQ LSVEDFENKI
601: QDAIKQTYER SIKAAQDYGI MKESPESLVH GANICAFLNI AQAMADQGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.