CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46542	Canola	cytosol	89.53	98.41
CDY52956	Canola	cytosol	89.21	98.05
CDY22863	Canola	cytosol	98.55	96.53
AT1G51720.1	Thale cress	cytosol	97.26	94.82
CDY18551	Canola	cytosol	48.79	90.45
VIT_09s0002g02530.t01	Wine grape	cytosol	84.54	82.68
PGSC0003DMT400017579	Potato	cytosol	78.91	78.91
KRH44203	Soybean	nucleus	80.68	78.65
KRH47165	Soybean	nucleus	80.19	78.18
Solyc01g068210.2.1	Tomato	nucleus	78.74	77.13
GSMUA_AchrUn_...	Banana	cytosol	52.01	72.1
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.85	69.92
GSMUA_Achr8P05390_001	Banana	cytosol	68.44	69.9
KRH38711	Soybean	endoplasmic reticulum	20.29	66.67
EES00914	Sorghum	cytosol	67.47	64.46
TraesCS3B01G227100.1	Wheat	cytosol	65.06	62.64
TraesCS3A01G202500.1	Wheat	cytosol	65.38	62.46
TraesCS3D01G206100.4	Wheat	cytosol	65.22	62.4
Os01t0558200-01	Rice	mitochondrion	67.63	61.14
Zm00001d044503_P004	Maize	cytosol	67.15	56.89
HORVU3Hr1G048870.1	Barley	plastid	65.7	53.19
CDX87065	Canola	cytosol, mitochondrion	10.14	27.75
CDY55181	Canola	mitochondrion	17.87	27.54
CDY14044	Canola	mitochondrion	17.87	27.54
CDY65233	Canola	mitochondrion	17.71	27.3
CDX70039	Canola	mitochondrion	17.55	27.05
CDX81051	Canola	mitochondrion	17.55	27.05
CDX78292	Canola	mitochondrion	17.39	26.8
CDY29969	Canola	cytosol, mitochondrion	17.55	26.52
CDY21157	Canola	cytosol, mitochondrion	17.55	26.52
CDY25453	Canola	cytosol, mitochondrion	16.91	25.55
CDY38492	Canola	mitochondrion	16.75	25.3
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	8.21	25.12
CDY64896	Canola	mitochondrion	17.07	23.19
CDY50862	Canola	cytosol, mitochondrion, plastid	17.23	16.41

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:A0A078H5L8	UniProt:A0A078H5L8
EnsemblPlants:CDY33875	ProteinID:CDY33875	ProteinID:CDY33875.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00055370001	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH
PFAM:PF00208	PFAM:PF02812	PRINTS:PR00082	PANTHER:PTHR43571	SMART:SM00839	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI0004EEF049	SEG:seg	:	:	:

Description

BnaC06g04780DBnaC06g04780D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H5L8]

Coordinates

chrLK032323:-:370505..374212

Molecular Weight (calculated)

69462.7 Da

IEP (calculated)

6.697

GRAVY (calculated)

-0.442

Length

621 amino acids

Sequence
(BLAST)

001: MDDMNLLQQA QRHQLVVSNL GEEIDLEIGP GEDDAAFANS SLIREPSAGE HDETKHMVLV SDLPSEDQDT SKGQTSAKRK KKVVKRWREE WADTYKWAYV
101: DMKDGTARIF CSVCREYGRK HRRNPYGNEG SRNMQMSALE EHNNSLLHKE ALRLQTASKD KIVVDKPIYV KTLMSKSAGS IVEGALKRDP NEIEFIQSVQ
201: ECVHALERVI AKNSHYVNIM ERLLEPERMI VFRVPWIDDR GETHVNRGFR VQFNQAPGPC RGGIRFHPSM NLSIAKFLGF QQTLKNALSP YKLGGASGGS
301: DFDPKGRSDN EIMRFCQSFM NEMYRYMGPD KDLPSEEVGV GTREMGYLFG QYRRLAGQFQ GSFTGPRIYW AASSLRTEAS GYGVVYFARL MLADMNKEIK
401: GLRCVVSGCG KIAMHVVEKL IACGAHPVTV SDSKGYLVDD DGFDYMKLAF LREIKSQQRS LRDYSKTYAR AKYFDEVKPW NERCDVAFPC ASQNEVDQAD
501: AINLVNAGCR LLVEGSNMPC TAEAVDVFRK ANVLIAPAIA AGAGGVAAGE IEVLRESNSM QWSAEDFESR LQEALKQTYE KALKAANDFG YQKESPEALL
601: HGATIAAFLN IAQAMADQGC V

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.