CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21157	Canola	cytosol, mitochondrion	85.78	95.38
CDY29969	Canola	cytosol, mitochondrion	85.56	95.13
AT3G03910.1	Thale cress	cytosol, mitochondrion	83.15	92.46
CDY25453	Canola	cytosol, mitochondrion	80.53	89.54
CDY38492	Canola	mitochondrion	79.87	88.81
KRG94812	Soybean	cytosol, mitochondrion	77.9	86.62
KRH06711	Soybean	cytosol, mitochondrion	77.9	86.62
PGSC0003DMT400021552	Potato	cytosol, mitochondrion	77.68	86.37
Solyc10g078550.1.1	Tomato	extracellular	77.02	85.64
KRH70158	Soybean	extracellular, mitochondrion	76.81	85.4
KRH08494	Soybean	mitochondrion	76.37	84.91
Os03t0794500-01	Rice	mitochondrion	75.71	84.18
HORVU4Hr1G061100.1	Barley	cytosol	13.57	83.78
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	75.05	83.45
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	74.84	83.21
TraesCS5A01G434100.1	Wheat	cytosol, mitochondrion	74.62	82.97
OQU90838	Sorghum	cytosol, mitochondrion	74.4	82.73
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	36.54	82.27
CDX87065	Canola	cytosol, mitochondrion	40.7	81.94
CDY65233	Canola	mitochondrion	68.27	77.42
CDX70039	Canola	mitochondrion	68.27	77.42
CDY55181	Canola	mitochondrion	68.05	77.17
CDY14044	Canola	mitochondrion	68.05	77.17
KRG88968	Soybean	cytosol	35.45	76.78
CDX81051	Canola	mitochondrion	67.61	76.67
CDX78292	Canola	mitochondrion	67.61	76.67
TraesCS5B01G437100.2	Wheat	extracellular	75.27	75.27
TraesCS5D01G442000.1	Wheat	mitochondrion, plastid	75.05	75.22
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	78.77	74.84
TraesCS7D01G412300.1	Wheat	cytosol	25.16	68.05
TraesCS1B01G166200.2	Wheat	cytosol	18.82	64.18
CDY50862	Canola	cytosol, mitochondrion, plastid	87.09	61.04
TraesCS1D01G322800.1	Wheat	cytosol	9.41	57.33
TraesCS5D01G021500.1	Wheat	cytosol	16.19	54.81
TraesCS1D01G080500.1	Wheat	cytosol	12.69	53.7
TraesCS6D01G031800.1	Wheat	cytosol	12.25	51.85
TraesCS1B01G472700.1	Wheat	cytosol	14.88	50.37
TraesCS7B01G165800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	10.72	38.58
Zm00001d016419_P001	Maize	mitochondrion, plastid	16.63	35.02
TraesCS7B01G339000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	18.82	27.48
CDY52956	Canola	cytosol	23.41	18.94
CDY46542	Canola	cytosol	23.19	18.76
CDY33875	Canola	cytosol	23.19	17.07
CDY22863	Canola	cytosol	23.41	16.88
CDY18551	Canola	cytosol	8.1	11.04

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:A0A078JGU7	UniProt:A0A078JGU7	EnsemblPlants:CDY64896
ProteinID:CDY64896	ProteinID:CDY64896.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00043829001
InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:Glu_DH	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH
PFAM:PF00208	PFAM:PF02812	PIRSF:PIRSF000185	PRINTS:PR00082	PANTHER:PTHR11606	PANTHER:PTHR11606:SF18
SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0004EE5B8A	:	:

Description

BnaC05g47630DGlutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078JGU7]

Coordinates

chrLK034596:-:4556..6578

Molecular Weight (calculated)

49770.7 Da

IEP (calculated)

7.031

GRAVY (calculated)

-0.205

Length

457 amino acids

Sequence
(BLAST)

001: MKHIYTNTNT KCVGISLYIY THLQYQESHF SVAFLSKSNK PKNKNTMNAL AATNRNFKLA SRLLGLDSKL EQSLLIPFRE IKVECTIPKD DGTLASFVGF
101: RVQHDNARGP MKGGIRYHPE VEPDEVNALA QLMTWKTAVA KIPYGGAKGG IGCDTSELSI SELERLTRVF TQKIHDLIGI HTDVPAPDMG TGSQTMAWIL
201: DEYSKFHGHS PAIVTGKPID LGGSLGRDAA TGRGVLFATE ALLNEHGKSI AGQRFVIQGF GNVGSWAAKL INEKGGKIVA VSDVTGAIKN KNGIDISGLI
301: EHTEENIGAK GFDGADAIDP DSVLVEDCDI LIPAALGGVI HRENANEIKA KFVIEGANHP TDPEADEILR KKGVVILPDI YANSGGVIVS YFEWVQNIQG
401: FMWDEEKVNK ELKSYMTRGF KDLKEMCKTH SCDLRMGAFS LGVNRVAQAT VIRGWGS

Best Arabidopsis Sequence Match ( AT3G03910.1 )
(BLAST)

001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRGFKDLKEM CQTHSCDLRM GAFTLGINRV
401: AQATTIRGWG S

Arabidopsis Description

GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.