Factsheet for TraesCS1D01G080500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G031800.1	Wheat	cytosol	98.15	98.15
TraesCS1D01G322800.1	Wheat	cytosol	56.48	81.33
TraesCS7D01G412300.1	Wheat	cytosol	69.44	44.38
TraesCS5D01G021500.1	Wheat	cytosol	49.07	39.26
TraesCS1B01G472700.1	Wheat	cytosol	44.44	35.56
TraesCS5A01G434100.1	Wheat	cytosol, mitochondrion	73.15	19.22
Os03t0794500-01	Rice	mitochondrion	68.52	18.0
TraesCS5D01G442000.1	Wheat	mitochondrion, plastid	73.15	17.32
OQU90838	Sorghum	cytosol, mitochondrion	65.74	17.27
KRG88968	Soybean	cytosol	32.41	16.59
Zm00001d034420_P002	Maize	plasma membrane	62.96	16.55
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	61.11	16.06
CDY29969	Canola	cytosol, mitochondrion	56.48	14.84
CDY21157	Canola	cytosol, mitochondrion	56.48	14.84
Bra036428.1-P	Field mustard	cytosol, mitochondrion	56.48	14.84
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	56.48	14.84
KRH08494	Soybean	mitochondrion	56.48	14.84
KRG94812	Soybean	cytosol, mitochondrion	55.56	14.6
AT3G03910.1	Thale cress	cytosol, mitochondrion	55.56	14.6
Solyc10g078550.1.1	Tomato	extracellular	53.7	14.11
KRH06711	Soybean	cytosol, mitochondrion	53.7	14.11
AT5G18170.1	Thale cress	cytosol, mitochondrion	53.7	14.11
KRH70158	Soybean	extracellular, mitochondrion	52.78	13.87
PGSC0003DMT400021552	Potato	cytosol, mitochondrion	52.78	13.87
CDY38492	Canola	mitochondrion	50.93	13.38
CDY25453	Canola	cytosol, mitochondrion	50.93	13.38
Bra002139.1-P	Field mustard	mitochondrion	50.93	13.38
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	57.41	12.89
CDY64896	Canola	mitochondrion	53.7	12.69
TraesCS2D01G388800.1	Wheat	mitochondrion	45.37	10.99
Bra031964.1-P	Field mustard	mitochondrion	51.85	9.89
CDY50862	Canola	cytosol, mitochondrion, plastid	50.93	8.44
TraesCS3D01G206100.4	Wheat	cytosol	17.59	2.93
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	0.93	0.49
HORVU4Hr1G061100.1	Barley	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS1D01G080500.1	EnsemblPlantsGene:TraesCS1D01G080500	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH_C
InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR11606	PANTHER:PTHR11606:SF18	PFAM:PF00208	SUPFAM:SSF51735	MapMan:25.1.6.1

Description

No Description!

Coordinates

chr1D:+:62894659..62896016

Molecular Weight (calculated)

11710.9 Da

IEP (calculated)

6.507

GRAVY (calculated)

-0.361

Length

108 amino acids

Sequence
(BLAST)

001: MAVKNSNGID IANLMKHSAE NRGIKGFDGG DAVDPISLLT EECDVLIPAA LGGVINNVRR QAVPTCRWRR AAPSLSRDNA DAIKAKYIIE AANHPTDPEA
101: DERRVCWS

Best Arabidopsis Sequence Match ( AT3G03910.2 )
(BLAST)

001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ VRLENQDCMT

Arabidopsis Description

GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.