Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytoskeleton, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
- mitochondrion 2
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G061100.1 | Barley | cytosol | 29.56 | 81.08 |
| CDX87065 | Canola | cytosol, mitochondrion | 69.95 | 62.56 |
| KRG88968 | Soybean | cytosol | 47.78 | 45.97 |
| AT3G03910.1 | Thale cress | cytosol, mitochondrion | 81.28 | 40.15 |
| CDY21157 | Canola | cytosol, mitochondrion | 81.28 | 40.15 |
| CDY29969 | Canola | cytosol, mitochondrion | 80.79 | 39.9 |
| CDY25453 | Canola | cytosol, mitochondrion | 79.31 | 39.17 |
| PGSC0003DMT400021552 | Potato | cytosol, mitochondrion | 78.82 | 38.93 |
| CDY38492 | Canola | mitochondrion | 78.82 | 38.93 |
| Solyc10g078550.1.1 | Tomato | extracellular | 78.33 | 38.69 |
| KRH06711 | Soybean | cytosol, mitochondrion | 76.85 | 37.96 |
| KRG94812 | Soybean | cytosol, mitochondrion | 76.85 | 37.96 |
| KRH70158 | Soybean | extracellular, mitochondrion | 76.35 | 37.71 |
| Os03t0794500-01 | Rice | mitochondrion | 75.37 | 37.23 |
| OQU90838 | Sorghum | cytosol, mitochondrion | 75.37 | 37.23 |
| KRH08494 | Soybean | mitochondrion | 75.37 | 37.23 |
| TraesCS5A01G434100.1 | Wheat | cytosol, mitochondrion | 75.37 | 37.23 |
| GSMUA_Achr5P02870_001 | Banana | cytosol, mitochondrion | 75.37 | 37.23 |
| GSMUA_Achr2P12720_001 | Banana | cytosol, mitochondrion | 74.38 | 36.74 |
| CDY64896 | Canola | mitochondrion | 82.27 | 36.54 |
| CDX70039 | Canola | mitochondrion | 72.41 | 36.48 |
| CDY55181 | Canola | mitochondrion | 72.41 | 36.48 |
| CDY65233 | Canola | mitochondrion | 72.41 | 36.48 |
| CDY14044 | Canola | mitochondrion | 72.41 | 36.48 |
| CDX78292 | Canola | mitochondrion | 71.43 | 35.98 |
| CDX81051 | Canola | mitochondrion | 71.43 | 35.98 |
| TraesCS5D01G442000.1 | Wheat | mitochondrion, plastid | 75.37 | 33.55 |
| TraesCS5B01G437100.2 | Wheat | extracellular | 75.37 | 33.48 |
| VIT_08s0007g07400.t01 | Wine grape | cytoskeleton, golgi, peroxisome | 77.34 | 32.64 |
| CDY50862 | Canola | cytosol, mitochondrion, plastid | 83.74 | 26.07 |
| Zm00001d016419_P001 | Maize | mitochondrion, plastid | 12.32 | 11.52 |
| CDY52956 | Canola | cytosol | 25.62 | 9.2 |
| CDY46542 | Canola | cytosol | 25.12 | 9.03 |
| CDY18551 | Canola | cytosol | 13.79 | 8.36 |
| CDY33875 | Canola | cytosol | 25.12 | 8.21 |
| CDY22863 | Canola | cytosol | 25.12 | 8.04 |
| TraesCS7B01G165800.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 2.96 | 4.72 |
| TraesCS1B01G472700.1 | Wheat | cytosol | 1.97 | 2.96 |
| TraesCS1B01G166200.2 | Wheat | cytosol | 1.48 | 2.24 |
| TraesCS5D01G021500.1 | Wheat | cytosol | 1.48 | 2.22 |
| TraesCS7D01G412300.1 | Wheat | cytosol | 1.48 | 1.78 |
| TraesCS1D01G322800.1 | Wheat | cytosol | 0.49 | 1.33 |
| TraesCS1D01G080500.1 | Wheat | cytosol | 0.49 | 0.93 |
| TraesCS6D01G031800.1 | Wheat | cytosol | 0.49 | 0.93 |
| TraesCS7B01G339000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 0.99 | 0.64 |
Protein Annotations
| MapMan:25.1.6.1 | Gene3D:3.40.50.10860 | GO:A0A078JEN0 | UniProt:A0A078JEN0 | EnsemblPlants:CDY64900 | ProteinID:CDY64900 |
| ProteinID:CDY64900.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006520 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00043833001 | InterPro:Glu/Leu/Phe/Val_DH | InterPro:Glu/Leu/Phe/Val_DH_AS |
| InterPro:Glu/Leu/Phe/Val_DH_dimer_dom | PFAM:PF02812 | PRINTS:PR00082 | ScanProsite:PS00074 | PANTHER:PTHR11606 | PANTHER:PTHR11606:SF18 |
| SUPFAM:SSF53223 | UniParc:UPI0004EE18F2 | : | : | : | : |
Description
BnaC05g47670DBnaC05g47670D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEN0]
Coordinates
chrLK034596:-:13077..14880
Molecular Weight (calculated)
22104.7 Da
IEP (calculated)
7.235
GRAVY (calculated)
-0.124
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MYQGFLVECT IPKDDGTLAS FVGFRVQHGN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG AKGGIGCDPS ELNISELERL TRVFTQKIHD
101: VIGIHTDVPA PDMGTGPQRM AWILDEYSKF HGHSPAIVTG KPIVAGSLGR DAATGRGLLF ETEALLNEHG KSIAGQRLAI QFCNMTSYMF LIGTCHNFNF
201: KSI
101: VIGIHTDVPA PDMGTGPQRM AWILDEYSKF HGHSPAIVTG KPIVAGSLGR DAATGRGLLF ETEALLNEHG KSIAGQRLAI QFCNMTSYMF LIGTCHNFNF
201: KSI
001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRGFKDLKEM CQTHSCDLRM GAFTLGINRV
401: AQATTIRGWG S
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRGFKDLKEM CQTHSCDLRM GAFTLGINRV
401: AQATTIRGWG S
Arabidopsis Description
GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.