CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra018927.1-P	Field mustard	cytosol	99.68	99.68
CDY33875	Canola	cytosol	96.53	98.55
CDY46542	Canola	cytosol	87.38	98.05
CDY52956	Canola	cytosol	87.07	97.7
AT1G51720.1	Thale cress	cytosol	96.37	95.92
CDY18551	Canola	cytosol	48.74	92.24
VIT_09s0002g02530.t01	Wine grape	cytosol	83.44	83.31
KRH44203	Soybean	nucleus	79.97	79.59
KRH47165	Soybean	nucleus	79.5	79.12
PGSC0003DMT400017579	Potato	cytosol	76.81	78.42
Solyc01g068210.2.1	Tomato	nucleus	77.76	77.76
GSMUA_AchrUn_...	Banana	cytosol	51.1	72.32
GSMUA_Achr8P05390_001	Banana	cytosol	67.19	70.07
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.56	69.92
KRH38711	Soybean	endoplasmic reticulum	20.03	67.2
EES00914	Sorghum	cytosol	66.25	64.62
TraesCS3A01G202500.1	Wheat	cytosol	64.67	63.08
TraesCS3D01G206100.4	Wheat	cytosol	64.51	63.02
TraesCS3B01G227100.1	Wheat	cytosol	63.88	62.79
Os01t0558200-01	Rice	mitochondrion	66.4	61.28
Zm00001d044503_P004	Maize	cytosol	66.09	57.16
HORVU3Hr1G048870.1	Barley	plastid	64.98	53.72
CDX87065	Canola	cytosol, mitochondrion	10.09	28.19
CDY55181	Canola	mitochondrion	17.67	27.79
CDY14044	Canola	mitochondrion	17.67	27.79
CDY65233	Canola	mitochondrion	17.51	27.54
CDX81051	Canola	mitochondrion	17.35	27.3
CDX70039	Canola	mitochondrion	17.35	27.3
CDX78292	Canola	mitochondrion	17.19	27.05
CDY29969	Canola	cytosol, mitochondrion	17.35	26.76
CDY21157	Canola	cytosol, mitochondrion	17.35	26.76
CDY25453	Canola	cytosol, mitochondrion	16.72	25.79
CDY38492	Canola	mitochondrion	16.56	25.55
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	8.04	25.12
CDY64896	Canola	mitochondrion	16.88	23.41
CDY50862	Canola	cytosol, mitochondrion, plastid	17.19	16.72

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:A0A078GDZ1	UniProt:A0A078GDZ1
EnsemblPlants:CDY22863	ProteinID:CDY22863	ProteinID:CDY22863.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00021219001
InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00208	PFAM:PF02812
PRINTS:PR00082	PANTHER:PTHR43571	SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0004EDE7F3
SEG:seg	:	:	:	:	:

Description

BnaA06g02140DBnaA06g02140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDZ1]

Coordinates

chrLK032136:+:530904..535237

Molecular Weight (calculated)

70745.2 Da

IEP (calculated)

6.576

GRAVY (calculated)

-0.426

Length

634 amino acids

Sequence
(BLAST)

001: MFGPTSGLGM NPSMDDMNLL QQAQRHQLVV SNLGEEIDLE IGPGEDEAAF ATSSLIREPS AGEHDETKHM VLVSDLPNED QETSKGQTSA KRKKKVVKRW
101: REEWADTYKW AYVDMKDGTA RIFCSVCREY GRKHRRNPYG NEGSRNMQMS ALEEHNNSLL HKEALRLQTA SKEKIVVDKP IYVKTLMSKS AGSIVEGALK
201: RDPNEIEFIQ SVQECVHALE RVIAKNSHYV NIMERLLEPE RMIVFRVPWI DDRGETHVNR GFRVQFNQAL GPCRGGIRFH PSMNLSIAKF LGFQQTLKNA
301: LSPYKLGGAS GGSDFDPKGR SDNEIMRFCQ SFMNEMYRYM GPDKDLPSEE AGVGTREMGY LFGQYRRLAG QFQGSFTGPR IYWAASSLRT EASGYGVVYF
401: ARLMLADMNK EIKGLRCVVS GCGKIAMHVV EKLIACGAHP VTVSDSKGYL VDDDGFDYMK LAFLREIKSQ QRSLRDYSKT YARAKYFDEV KPWNERCDVA
501: FPCASQNEVD QADAINLVNA GCRLLVEGSN MPCTAEAVDV FRKANVLIAP AIAAGAGGVA AGEIEVLRES NSMQWSAEDF ESSLQEALKQ TYEKALKAAN
601: DFGYQKESPE ALLHGATIAA FLNIAQAMTD QGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.