Factsheet for GSMUA_AchrUn_randomP01850_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P05390_001	Banana	cytosol	87.05	64.14
KRH38711	Soybean	endoplasmic reticulum	25.45	60.32
CDY46542	Canola	cytosol	72.54	57.52
CDY52956	Canola	cytosol	72.32	57.35
VIT_09s0002g02530.t01	Wine grape	cytosol	77.46	54.65
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.73	53.66
EES00914	Sorghum	cytosol	77.23	53.23
TraesCS3B01G227100.1	Wheat	cytosol	75.45	52.4
PGSC0003DMT400017579	Potato	cytosol	72.54	52.33
TraesCS3A01G202500.1	Wheat	cytosol	75.89	52.31
TraesCS3D01G206100.4	Wheat	cytosol	75.67	52.23
CDY33875	Canola	cytosol	72.1	52.01
KRH44203	Soybean	nucleus	73.88	51.96
KRH47165	Soybean	nucleus	73.21	51.49
Solyc01g068210.2.1	Tomato	nucleus	72.54	51.26
AT1G51720.1	Thale cress	cytosol	72.77	51.18
CDY22863	Canola	cytosol	72.32	51.1
Bra018927.1-P	Field mustard	cytosol	72.32	51.1
Bra014299.1-P	Field mustard	cytosol	72.54	50.23
Os01t0558200-01	Rice	mitochondrion	76.79	50.07
Zm00001d044503_P004	Maize	cytosol	76.34	46.66
HORVU3Hr1G048870.1	Barley	plastid	75.45	44.07
CDY18551	Canola	cytosol	23.88	31.94
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	22.77	24.82
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	22.54	24.57
GSMUA_Achr2P10430_001	Banana	mitochondrion	22.54	24.57
GSMUA_AchrUn_...	Banana	nucleus	6.92	16.58

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639
GO:GO:0055114	EnsemblPlantsGene:GSMUA_AchrUn_randomG01850_001	EnsemblPlants:GSMUA_AchrUn_randomP01850_001	EnsemblPlants:GSMUA_AchrUn_randomT01850_001	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C
InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:Glu_DH	UniProt:M0U5J7	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH	PFAM:PF00208
PFAM:PF02812	PIRSF:PIRSF000185	PRINTS:PR00082	PANTHER:PTHR43571	SMART:SM00839	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI000296DD3B	:	:	:	:

Description

Putative NADP-specific glutamate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG01850_001]

Coordinates

chrchrUn_random:+:8478172..8487632

Molecular Weight (calculated)

49680.8 Da

IEP (calculated)

5.985

GRAVY (calculated)

-0.143

Length

448 amino acids

Sequence
(BLAST)

001: MLKSASSVLE SVLRRDPHEV EFIQSVQEVV HSLEPVLVKN SQYVHILERL LEPERALIFR VPWVDDRGET HVNRGFRVQF SQALGPCRGG LRFHPSMNLS
101: IAKFLGFEQT LRNALSPFKL GGAGGGSDFD PMGKSETEIM RFCQSFMDEL YKYLGPDEDL PSEDMGVGPR EMGYLFGQYR RLAGHFQGSF TGPRIFWSGS
201: TLRTEATGYG LVFFARLILA DMNKELKGLR CVISGAGKIA MHVLEKLFSC GAIPITISDS KGYLLDEDGF DFVKLSFLRD IKVQQKSLRD YLKSNPRAKY
301: FEGAKPWSEQ CDIAFPCASQ NEIDQPDAVA LINSGCQILI EGSTMPCTPQ AFDVLRKANI LVAPAKTASA GGVAVGELEL SHECNLMQWS PEDFEAKLQE
401: MMKQIHEKSL KAASEYGCMK DSPEALVHGG NICAFLNLAH ALIDQGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.