Factsheet for GSMUA_Achr2P10430_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os04t0543900-02	Rice	extracellular, mitochondrion, plasma membrane, plastid	87.59	87.59
TraesCS2B01G409300.1	Wheat	mitochondrion	86.37	86.37
TraesCS2A01G389900.1	Wheat	mitochondrion	86.13	86.13
EES11206	Sorghum	mitochondrion	86.13	86.13
CDX87065	Canola	cytosol, mitochondrion	47.45	85.9
Zm00001d025984_P001	Maize	mitochondrion	84.43	84.43
AT5G07440.1	Thale cress	mitochondrion	83.94	83.94
KRH77294	Soybean	mitochondrion	83.7	83.7
Bra005935.1-P	Field mustard	mitochondrion	83.45	83.45
Solyc03g094010.2.1	Tomato	unclear	83.45	83.45
KRH04228	Soybean	mitochondrion	83.45	83.25
Bra009263.1-P	Field mustard	mitochondrion	83.21	83.21
Os02t0650900-01	Rice	mitochondrion	83.21	83.21
CDX78292	Canola	mitochondrion	81.51	83.13
CDX81051	Canola	mitochondrion	81.51	83.13
PGSC0003DMT400021509	Potato	mitochondrion	82.97	82.97
Bra028697.1-P	Field mustard	mitochondrion	82.73	82.73
CDY55181	Canola	mitochondrion	81.02	82.63
CDY14044	Canola	mitochondrion	81.02	82.63
CDX70039	Canola	mitochondrion	81.02	82.63
CDY65233	Canola	mitochondrion	81.02	82.63
KRH57522	Soybean	mitochondrion	82.73	82.52
PGSC0003DMT400041325	Potato	mitochondrion	82.48	82.48
PGSC0003DMT400070951	Potato	mitochondrion	82.24	82.24
HORVU2Hr1G093030.1	Barley	cytosol, mitochondrion	52.8	81.89
VIT_16s0039g02750.t01	Wine grape	cytosol	81.51	81.51
Solyc06g033860.1.1	Tomato	unclear	81.27	81.27
VIT_16s0039g02720.t01	Wine grape	mitochondrion	81.27	81.27
Solyc05g052100.2.1	Tomato	unclear	81.51	81.11
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	80.29	80.29
TraesCS2D01G388800.1	Wheat	mitochondrion	86.37	79.6
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	79.56	79.56
VIT_16s0039g02740.t01	Wine grape	cytosol, mitochondrion	59.85	59.71
GSMUA_AchrUn_...	Banana	cytosol	24.57	22.54
GSMUA_AchrUn_...	Banana	nucleus	8.27	18.18
GSMUA_Achr8P05390_001	Banana	cytosol	24.57	16.61

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004352	GO:GO:0004353	GO:GO:0005488	GO:GO:0005507	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774
GO:GO:0006520	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009628
GO:GO:0009651	GO:GO:0009987	GO:GO:0016020	GO:GO:0016491	GO:GO:0016639	GO:GO:0046686
GO:GO:0050897	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr2G10430_001	EnsemblPlants:GSMUA_Achr2P10430_001	EnsemblPlants:GSMUA_Achr2T10430_001	InterPro:Glu/Leu/Phe/Val_DH
InterPro:Glu/Leu/Phe/Val_DH_AS	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:Glu_DH	UniProt:M0S6T4	InterPro:NAD(P)-bd_dom_sf
InterPro:NAD_bind_Glu_DH	PFAM:PF00208	PFAM:PF02812	PIRSF:PIRSF000185	PRINTS:PR00082	ScanProsite:PS00074
PANTHER:PTHR11606	PANTHER:PTHR11606:SF18	SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI000294F539

Description

Glutamate dehydrogenase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr2G10430_001]

Coordinates

chr2:+:13537028..13541436

Molecular Weight (calculated)

44493.3 Da

IEP (calculated)

6.886

GRAVY (calculated)

-0.190

Length

411 amino acids

Sequence
(BLAST)

001: MNALAATSRN FRQAARILGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS YVGFRVQHDN ARGPMKGGIR YHHEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPS ELSKSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVI YATKSLLAEH
201: GKSISGSTFV IQGFGNVGSW AAQILHEEGG KVIAIGDITG AIKNPNGIDI PALIKHRSEG GAVKDFKGAD PLDKDELLVH ECDVLIPSAL GGVLNRDNAA
301: NVKAKYIVEA ANHPTDPEAD EIFAKKGIPV LPDIYANAGG VTVSYFEWVQ NIQGFMWDEE KVNMELHKYM RSAFNNIKAM CKTHDCNLRM GAFTLGVNRV
401: ARATLLRGWE A

Best Arabidopsis Sequence Match ( AT5G07440.1 )
(BLAST)

001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A

Arabidopsis Description

GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.