Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion
BaCelLo:mitochondrion
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
mitochondrion: 19010998
mitochondrion: 23027867
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os04t0543900-02 Rice extracellular, mitochondrion, plasma membrane, plastid 87.35 87.35
GSMUA_Achr2P10430_001 Banana mitochondrion 83.21 83.21
Solyc03g094010.2.1 Tomato unclear 81.75 81.75
KRH04228 Soybean mitochondrion 81.51 81.31
PGSC0003DMT400021509 Potato mitochondrion 81.02 81.02
KRH77294 Soybean mitochondrion 80.54 80.54
PGSC0003DMT400041325 Potato mitochondrion 79.81 79.81
VIT_16s0039g02750.t01 Wine grape cytosol 79.81 79.81
KRH57522 Soybean mitochondrion 79.81 79.61
PGSC0003DMT400070951 Potato mitochondrion 79.32 79.32
Solyc05g052100.2.1 Tomato unclear 79.56 79.18
VIT_16s0039g02720.t01 Wine grape mitochondrion 78.83 78.83
Solyc06g033860.1.1 Tomato unclear 78.35 78.35
Os03t0794500-01 Rice mitochondrion 76.89 76.89
VIT_16s0039g02740.t01 Wine grape cytosol, mitochondrion 57.42 57.28
Os01t0358900-00 Rice cytosol 12.65 46.43
Os01t0558200-01 Rice mitochondrion 25.3 15.14
Protein Annotations
MapMan:25.1.6.1Gene3D:3.40.50.10860Gene3D:3.40.50.720EntrezGene:4330164EMBL:AB035927EMBL:AK103028
ProteinID:BAD26562.1ProteinID:BAF09503.1ProteinID:BAS80054.1ProteinID:EAZ24022.1GO:GO:0003674GO:GO:0003824
GO:GO:0004353GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0006520GO:GO:0006950GO:GO:0006995GO:GO:0007154GO:GO:0008150GO:GO:0008152
GO:GO:0009605GO:GO:0009628GO:GO:0009651GO:GO:0009987GO:GO:0009991GO:GO:0010446
GO:GO:0016491GO:GO:0016639GO:GO:0055114InterPro:Glu/Leu/Phe/Val_DHInterPro:Glu/Leu/Phe/Val_DH_ASInterPro:Glu/Leu/Phe/Val_DH_C
InterPro:Glu/Leu/Phe/Val_DH_dimer_domInterPro:Glu_DHInterPro:NAD(P)-bd_dom_sfInterPro:NAD_bind_Glu_DHEnsemblPlantsGene:Os02g0650900EnsemblPlants:Os02t0650900-01
PFAM:PF00208PFAM:PF02812PIRSF:PIRSF000185PRINTS:PR00082ScanProsite:PS00074PANTHER:PTHR11606
PANTHER:PTHR11606:SF18UniProt:Q6H3Y7SMART:SM00839SUPFAM:SSF51735SUPFAM:SSF53223UniParc:UPI00003B4745
RefSeq:XP_015622776.1:::::
Description
GLUTAMATE DEHYDROGENASE 3Similar to Glutamate dehydrogenase 2 (EC 1.4.1.3) (GDH 2). (Os02t0650900-01)
Coordinates
chr2:+:26240232..26242980
Molecular Weight (calculated)
44456.4 Da
IEP (calculated)
6.604
GRAVY (calculated)
-0.136
Length
411 amino acids
Sequence
(BLAST)
001: MNALAATSRN FRQAARLLGL DSKLQKSLLI PLREIKVECT IPKDDGTLAT FVGFRVQHDN SRGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVAAVPYGG
101: AKGGIGCTPG ELSRSELERL TRVFTQKIHD LIGINTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVM YATEALLTEY
201: SESISGSTFV IQGLGNVGSW AAKLIHQKGG KIVAVGDVTG AIRNKSGIDI PALLKHRSEG GSLEDFYGAE VMDAAELLVH ECDVLVPCAL GGVLNRENAA
301: EVKARFIIEG ANHPTDTEAD EILAKKGVIV LPDIYANSGG VVVSYFEWVQ NIQGFMWDEE KVNRELQKYM KNAFQNIKDM CKSQNCNLRM GAFTLGVNRV
401: AKATLLRGWE A
Best Arabidopsis Sequence Match ( AT5G07440.1 )
(BLAST)
001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A
Arabidopsis Description
GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.