Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009263.1-P | Field mustard | mitochondrion | 97.32 | 97.32 |
| CDX70039 | Canola | mitochondrion | 95.13 | 97.02 |
| CDY65233 | Canola | mitochondrion | 94.89 | 96.77 |
| CDX78292 | Canola | mitochondrion | 94.89 | 96.77 |
| CDX81051 | Canola | mitochondrion | 94.89 | 96.77 |
| Bra005935.1-P | Field mustard | mitochondrion | 96.59 | 96.59 |
| CDY14044 | Canola | mitochondrion | 93.67 | 95.53 |
| CDY55181 | Canola | mitochondrion | 93.43 | 95.29 |
| Bra028697.1-P | Field mustard | mitochondrion | 95.13 | 95.13 |
| CDX87065 | Canola | cytosol, mitochondrion | 50.37 | 91.19 |
| Solyc03g094010.2.1 | Tomato | unclear | 88.81 | 88.81 |
| PGSC0003DMT400021509 | Potato | mitochondrion | 88.32 | 88.32 |
| PGSC0003DMT400041325 | Potato | mitochondrion | 87.59 | 87.59 |
| PGSC0003DMT400070951 | Potato | mitochondrion | 87.1 | 87.1 |
| KRH57522 | Soybean | mitochondrion | 87.1 | 86.89 |
| KRH77294 | Soybean | mitochondrion | 86.86 | 86.86 |
| KRH04228 | Soybean | mitochondrion | 86.86 | 86.65 |
| Solyc06g033860.1.1 | Tomato | unclear | 86.37 | 86.37 |
| Solyc05g052100.2.1 | Tomato | unclear | 85.89 | 85.47 |
| VIT_16s0039g02750.t01 | Wine grape | cytosol | 85.4 | 85.4 |
| VIT_16s0039g02720.t01 | Wine grape | mitochondrion | 85.4 | 85.4 |
| GSMUA_Achr2P10430_001 | Banana | mitochondrion | 83.94 | 83.94 |
| TraesCS2B01G409300.1 | Wheat | mitochondrion | 82.97 | 82.97 |
| TraesCS2A01G389900.1 | Wheat | mitochondrion | 82.48 | 82.48 |
| EES11206 | Sorghum | mitochondrion | 82.24 | 82.24 |
| Zm00001d025984_P001 | Maize | mitochondrion | 80.29 | 80.29 |
| AT5G18170.1 | Thale cress | cytosol, mitochondrion | 80.05 | 80.05 |
| HORVU2Hr1G093030.1 | Barley | cytosol, mitochondrion | 51.09 | 79.25 |
| AT3G03910.1 | Thale cress | cytosol, mitochondrion | 78.1 | 78.1 |
| VIT_00s1491g00010.t01 | Wine grape | cytosol, mitochondrion | 45.5 | 77.92 |
| TraesCS2D01G388800.1 | Wheat | mitochondrion | 82.97 | 76.46 |
| VIT_00s0204g00160.t01 | Wine grape | cytosol | 16.06 | 70.21 |
| VIT_00s0204g00150.t01 | Wine grape | cytosol, mitochondrion, plastid | 29.44 | 68.75 |
| VIT_16s0039g02740.t01 | Wine grape | cytosol, mitochondrion | 63.26 | 63.11 |
| Os01t0358900-00 | Rice | cytosol | 13.38 | 49.11 |
| AT1G51720.1 | Thale cress | cytosol | 26.28 | 16.95 |
Protein Annotations
| MapMan:25.1.6.1 | Gene3D:3.40.50.10860 | Gene3D:3.40.50.720 | EntrezGene:830635 | UniProt:A0A178UEW8 | ProteinID:AED91157.1 |
| ProteinID:AED91158.1 | ArrayExpress:AT5G07440 | EnsemblPlantsGene:AT5G07440 | RefSeq:AT5G07440 | TAIR:AT5G07440 | RefSeq:AT5G07440-TAIR-G |
| EnsemblPlants:AT5G07440.1 | TAIR:AT5G07440.1 | ProteinID:CAB87933.1 | Symbol:GDH2 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004352 | GO:GO:0004353 | GO:GO:0005488 | GO:GO:0005507 | GO:GO:0005524 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005739 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0006520 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008270 |
| GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0016639 |
| GO:GO:0046686 | GO:GO:0050897 | GO:GO:0055114 | InterPro:Glu/Leu/Phe/Val_DH | InterPro:Glu/Leu/Phe/Val_DH_AS | InterPro:Glu/Leu/Phe/Val_DH_C |
| InterPro:Glu/Leu/Phe/Val_DH_dimer_dom | InterPro:Glu_DH | InterPro:NAD(P)-bd_dom_sf | InterPro:NAD_bind_Glu_DH | RefSeq:NP_001119183.1 | RefSeq:NP_196361.1 |
| ProteinID:OAO91814.1 | PFAM:PF00208 | PFAM:PF02812 | PIRSF:PIRSF000185 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000071 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00082 |
| ScanProsite:PS00074 | PANTHER:PTHR11606 | PANTHER:PTHR11606:SF24 | UniProt:Q38946 | SMART:SM00839 | SUPFAM:SSF51735 |
| SUPFAM:SSF53223 | EMBL:U56635 | UniParc:UPI00001292DA | : | : | : |
Description
GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
Coordinates
chr5:+:2355759..2358241
Molecular Weight (calculated)
44701.6 Da
IEP (calculated)
6.510
GRAVY (calculated)
-0.148
Length
411 amino acids
Sequence
(BLAST)
(BLAST)
001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.