Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G409300.1 | Wheat | mitochondrion | 97.74 | 63.02 |
| TraesCS2A01G389900.1 | Wheat | mitochondrion | 96.98 | 62.53 |
| Os04t0543900-02 | Rice | extracellular, mitochondrion, plasma membrane, plastid | 90.57 | 58.39 |
| TraesCS2D01G388800.1 | Wheat | mitochondrion | 97.74 | 58.07 |
| EES11206 | Sorghum | mitochondrion | 88.68 | 57.18 |
| Zm00001d025984_P001 | Maize | mitochondrion | 87.92 | 56.69 |
| GSMUA_Achr2P10430_001 | Banana | mitochondrion | 81.89 | 52.8 |
| Bra009263.1-P | Field mustard | mitochondrion | 80.0 | 51.58 |
| KRH04228 | Soybean | mitochondrion | 80.0 | 51.46 |
| KRH77294 | Soybean | mitochondrion | 79.25 | 51.09 |
| AT5G07440.1 | Thale cress | mitochondrion | 79.25 | 51.09 |
| KRH57522 | Soybean | mitochondrion | 79.25 | 50.97 |
| Bra028697.1-P | Field mustard | mitochondrion | 78.87 | 50.85 |
| CDX70039 | Canola | mitochondrion | 76.98 | 50.62 |
| CDY65233 | Canola | mitochondrion | 76.98 | 50.62 |
| Bra005935.1-P | Field mustard | mitochondrion | 78.11 | 50.37 |
| VIT_16s0039g02720.t01 | Wine grape | mitochondrion | 77.74 | 50.12 |
| CDY55181 | Canola | mitochondrion | 75.85 | 49.88 |
| CDY14044 | Canola | mitochondrion | 75.85 | 49.88 |
| Solyc03g094010.2.1 | Tomato | unclear | 76.98 | 49.63 |
| VIT_16s0039g02750.t01 | Wine grape | cytosol | 76.98 | 49.63 |
| PGSC0003DMT400070951 | Potato | mitochondrion | 76.98 | 49.63 |
| CDX78292 | Canola | mitochondrion | 75.47 | 49.63 |
| CDX81051 | Canola | mitochondrion | 75.47 | 49.63 |
| PGSC0003DMT400021509 | Potato | mitochondrion | 76.23 | 49.15 |
| Solyc06g033860.1.1 | Tomato | unclear | 75.47 | 48.66 |
| Solyc05g052100.2.1 | Tomato | unclear | 73.96 | 47.46 |
| PGSC0003DMT400041325 | Potato | mitochondrion | 73.58 | 47.45 |
| VIT_16s0039g02740.t01 | Wine grape | cytosol, mitochondrion | 49.43 | 31.8 |
| CDX87065 | Canola | cytosol, mitochondrion | 22.64 | 26.43 |
| HORVU3Hr1G048870.1 | Barley | plastid | 21.89 | 7.56 |
| HORVU4Hr1G061100.1 | Barley | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:25.1.6.1 | Gene3D:3.40.50.720 | UniProt:A0A287IZ51 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006520 |
| GO:GO:0006950 | GO:GO:0006995 | GO:GO:0007154 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009409 |
| GO:GO:0009605 | GO:GO:0009628 | GO:GO:0009651 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010446 |
| GO:GO:0016491 | GO:GO:0016639 | GO:GO:0055114 | GO:GO:1901698 | InterPro:Glu/Leu/Phe/Val_DH | InterPro:Glu/Leu/Phe/Val_DH_C |
| EnsemblPlantsGene:HORVU2Hr1G093030 | EnsemblPlants:HORVU2Hr1G093030.1 | InterPro:NAD(P)-bd_dom_sf | InterPro:NAD_bind_Glu_DH | PFAM:PF00208 | PRINTS:PR00082 |
| PANTHER:PTHR11606 | PANTHER:PTHR11606:SF24 | SMART:SM00839 | SUPFAM:SSF51735 | SUPFAM:SSF53223 | UniParc:UPI000B473BF3 |
Description
No Description!
Coordinates
chrchr2H:-:656413336..656415155
Molecular Weight (calculated)
28735.5 Da
IEP (calculated)
6.419
GRAVY (calculated)
-0.081
Length
265 amino acids
Sequence
(BLAST)
(BLAST)
001: RQTMAWIFDE YSKFHGHSPA VVTGKPIDLG GSLGRDAATG RGVMYATEAL LAEYGKSISG STFVIQGFGN VGSWAAQLIH EKGGKVIALG DVSGTIRNKA
101: GIDVPALMKH RNEGGQLKDF HGAEVMDSSE LLVHECDVLL PCALGGVLNK DNAPDVKAKF IIEAANHPTD PEADEILTKK GVVVLPDIYA NAGGVIVSYF
201: EWVQNIQGFM WEEEKVNMEL HKYMNSAFQH IKAMCKSQDC SLRMGAFTLG VNRVARATIL RGWEA
101: GIDVPALMKH RNEGGQLKDF HGAEVMDSSE LLVHECDVLL PCALGGVLNK DNAPDVKAKF IIEAANHPTD PEADEILTKK GVVVLPDIYA NAGGVIVSYF
201: EWVQNIQGFM WEEEKVNMEL HKYMNSAFQH IKAMCKSQDC SLRMGAFTLG VNRVARATIL RGWEA
001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A
Arabidopsis Description
GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.