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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion
BaCelLo:mitochondrion
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d025984_P001 Maize mitochondrion 95.38 95.38
Os04t0543900-02 Rice extracellular, mitochondrion, plasma membrane, plastid 90.75 90.75
TraesCS2B01G409300.1 Wheat mitochondrion 90.51 90.51
TraesCS2A01G389900.1 Wheat mitochondrion 90.27 90.27
HORVU2Hr1G093030.1 Barley cytosol, mitochondrion 57.18 88.68
GSMUA_Achr2P10430_001 Banana mitochondrion 86.13 86.13
CDX87065 Canola cytosol, mitochondrion 46.23 83.7
TraesCS2D01G388800.1 Wheat mitochondrion 90.51 83.41
Bra009263.1-P Field mustard mitochondrion 82.48 82.48
KRH04228 Soybean mitochondrion 82.48 82.28
AT5G07440.1 Thale cress mitochondrion 82.24 82.24
CDX70039 Canola mitochondrion 80.29 81.89
CDY65233 Canola mitochondrion 80.29 81.89
PGSC0003DMT400070951 Potato mitochondrion 81.75 81.75
VIT_16s0039g02750.t01 Wine grape cytosol 81.51 81.51
Solyc03g094010.2.1 Tomato unclear 81.51 81.51
Bra005935.1-P Field mustard mitochondrion 81.27 81.27
Bra028697.1-P Field mustard mitochondrion 81.27 81.27
CDY55181 Canola mitochondrion 79.56 81.14
CDY14044 Canola mitochondrion 79.56 81.14
CDX81051 Canola mitochondrion 79.56 81.14
CDX78292 Canola mitochondrion 79.56 81.14
KRH77294 Soybean mitochondrion 81.02 81.02
KRH57522 Soybean mitochondrion 81.02 80.83
PGSC0003DMT400021509 Potato mitochondrion 80.78 80.78
OQU90838 Sorghum cytosol, mitochondrion 80.54 80.54
VIT_16s0039g02720.t01 Wine grape mitochondrion 80.54 80.54
Solyc06g033860.1.1 Tomato unclear 80.29 80.29
PGSC0003DMT400041325 Potato mitochondrion 79.56 79.56
Solyc05g052100.2.1 Tomato unclear 78.83 78.45
VIT_16s0039g02740.t01 Wine grape cytosol, mitochondrion 59.85 59.71
EES00914 Sorghum cytosol 25.55 16.15
Protein Annotations
MapMan:25.1.6.1Gene3D:3.40.50.10860Gene3D:3.40.50.720EntrezGene:8055934UniProt:C5YD28EnsemblPlants:EES11206
ProteinID:EES11206ProteinID:EES11206.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004352
GO:GO:0004353GO:GO:0005488GO:GO:0005507GO:GO:0005524GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0005737GO:GO:0005739GO:GO:0005773GO:GO:0005774GO:GO:0006520
GO:GO:0006950GO:GO:0006995GO:GO:0007154GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0009409GO:GO:0009605GO:GO:0009628GO:GO:0009651GO:GO:0009987GO:GO:0009991
GO:GO:0010446GO:GO:0016020GO:GO:0016491GO:GO:0016639GO:GO:0046686GO:GO:0050897
GO:GO:0055114GO:GO:1901698InterPro:Glu/Leu/Phe/Val_DHInterPro:Glu/Leu/Phe/Val_DH_ASInterPro:Glu/Leu/Phe/Val_DH_CInterPro:Glu/Leu/Phe/Val_DH_dimer_dom
InterPro:Glu_DHInterPro:NAD(P)-bd_dom_sfInterPro:NAD_bind_Glu_DHPFAM:PF00208PFAM:PF02812PIRSF:PIRSF000185
PRINTS:PR00082ScanProsite:PS00074PANTHER:PTHR11606PANTHER:PTHR11606:SF18SMART:SM00839EnsemblPlantsGene:SORBI_3006G165400
SUPFAM:SSF51735SUPFAM:SSF53223unigene:Sbi.2246UniParc:UPI0001A86F5DRefSeq:XP_002446878.1:
Description
hypothetical protein
Coordinates
chr6:+:52303045..52306848
Molecular Weight (calculated)
44441.5 Da
IEP (calculated)
6.700
GRAVY (calculated)
-0.119
Length
411 amino acids
Sequence
(BLAST)
001: MNALAATSRN FRRASKLLGL DSKLEQSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVAAVPYGG
101: AKGGIGCSPG ELSRSELERL TRVFTQKIHD LIGTHTDVPA PDMGTNAQTM AWMLDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVM YATEALLAEY
201: GKCISGSTFV IQGFGNVGSW AARLIHEKGG KIIAIGDVTG SIKNMSGIDI PALMKHKNEG HAMKDFHGAE VMDSTELLVH ECDVLVPCAL GGVLNKDNAP
301: SVKAKFIVEA ANHPTDPEAD EILAKKGVVV LPDIYANSGG VIVSYFEWVQ NIQGFMWDEE KVNNELEKYM SSAFQHIKAM CKSLDCNLRM GAFTLGVNRV
401: ARATLLRGWE A
Best Arabidopsis Sequence Match ( AT5G07440.1 )
(BLAST)
001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A
Arabidopsis Description
GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.