Factsheet for TraesCS2D01G388800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G409300.1	Wheat	mitochondrion	92.15	100.0
TraesCS2A01G389900.1	Wheat	mitochondrion	91.7	99.51
HORVU2Hr1G093030.1	Barley	cytosol, mitochondrion	58.07	97.74
Os04t0543900-02	Rice	extracellular, mitochondrion, plasma membrane, plastid	85.43	92.7
EES11206	Sorghum	mitochondrion	83.41	90.51
Zm00001d025984_P001	Maize	mitochondrion	81.84	88.81
GSMUA_Achr2P10430_001	Banana	mitochondrion	79.6	86.37
CDX87065	Canola	cytosol, mitochondrion	42.83	84.14
Bra009263.1-P	Field mustard	mitochondrion	77.13	83.7
CDX70039	Canola	mitochondrion	75.11	83.13
CDY65233	Canola	mitochondrion	75.11	83.13
KRH04228	Soybean	mitochondrion	76.68	83.01
AT5G07440.1	Thale cress	mitochondrion	76.46	82.97
KRH77294	Soybean	mitochondrion	76.23	82.73
Bra028697.1-P	Field mustard	mitochondrion	76.23	82.73
Solyc03g094010.2.1	Tomato	unclear	76.23	82.73
CDY55181	Canola	mitochondrion	74.66	82.63
CDY14044	Canola	mitochondrion	74.66	82.63
KRH57522	Soybean	mitochondrion	76.01	82.28
Bra005935.1-P	Field mustard	mitochondrion	75.78	82.24
PGSC0003DMT400070951	Potato	mitochondrion	75.78	82.24
CDX78292	Canola	mitochondrion	74.22	82.13
CDX81051	Canola	mitochondrion	74.22	82.13
VIT_16s0039g02720.t01	Wine grape	mitochondrion	75.56	82.0
PGSC0003DMT400021509	Potato	mitochondrion	75.56	82.0
VIT_16s0039g02750.t01	Wine grape	cytosol	75.34	81.75
Solyc06g033860.1.1	Tomato	unclear	74.66	81.02
PGSC0003DMT400041325	Potato	mitochondrion	73.99	80.29
Solyc05g052100.2.1	Tomato	unclear	73.09	78.93
TraesCS5D01G442000.1	Wheat	mitochondrion, plastid	73.99	72.37
VIT_16s0039g02740.t01	Wine grape	cytosol, mitochondrion	55.38	59.95
TraesCS7D01G412300.1	Wheat	cytosol	22.65	59.76
TraesCS5D01G021500.1	Wheat	cytosol	15.92	52.59
TraesCS1D01G322800.1	Wheat	cytosol	8.74	52.0
TraesCS1D01G080500.1	Wheat	cytosol	10.99	45.37
TraesCS6D01G031800.1	Wheat	cytosol	10.76	44.44
TraesCS3D01G206100.4	Wheat	cytosol	22.65	15.56

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520
GO:GO:0006950	GO:GO:0006995	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0009409
GO:GO:0009605	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0009991	GO:GO:0010446
GO:GO:0016491	GO:GO:0016639	GO:GO:0055114	GO:GO:1901698	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_AS
InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:Glu_DH	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH	PFAM:PF00208
PFAM:PF02812	PIRSF:PIRSF000185	PRINTS:PR00082	ScanProsite:PS00074	PANTHER:PTHR11606	PANTHER:PTHR11606:SF18
SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	EnsemblPlantsGene:TraesCS2D01G388800	EnsemblPlants:TraesCS2D01G388800.1	TIGR:cd01076
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:+:495094985..495099984

Molecular Weight (calculated)

48270.0 Da

IEP (calculated)

6.946

GRAVY (calculated)

-0.129

Length

446 amino acids

Sequence
(BLAST)

001: MNALAATSRN FRQAARLLGL DSKLEKSLLI PFREIKVAPR SLLSPLLSSP RRRPELDSVC LLSISGSFPS QVECTIPKDD GTLASFVGFR VQHDNARGPM
101: KGGIRYHPEV DPDEVNALAQ LMTWKTAVAA VPYGGAKGGI GCSPGDLSRS ELERLTRVFT QKIHDLIGTH TDIPAPDMGT NSQTMAWIFD EYSKFHGHSP
201: AVVTGKPIDL GGSLGRDAAT GRGVMYATEA LLAEYGKSIS GSTFVIQGFG NVGSWAAQLI HEKGGKVIAL GDVSGTIRNK AGIDVPALMK HRNEGGQLKD
301: FHGAEVMDAS ELLVHECDVL LPCALGGVLN RENAPDVKAK FIIEAANHPT DPEADEILTK KGVVVLPDIY ANAGGVIVSY FEWVQNIQGF MWEEEKVNME
401: LHKYMNSAFQ NIKAMCKSQD CNLRMGAFTL GVNRVARATI LRGWEA

Best Arabidopsis Sequence Match ( AT5G07440.1 )
(BLAST)

001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A

Arabidopsis Description

GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.