Factsheet for TraesCS3D01G206100.4

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G202500.1	Wheat	cytosol	99.38	99.23
TraesCS3B01G227100.1	Wheat	cytosol	98.61	99.22
HORVU3Hr1G048870.1	Barley	plastid	98.61	83.44
Os01t0558200-01	Rice	mitochondrion	87.37	82.53
EES00914	Sorghum	cytosol	76.12	76.0
GSMUA_Achr8P05390_001	Banana	cytosol	71.19	75.99
GSMUA_AchrUn_...	Banana	cytosol	52.23	75.67
CDY52956	Canola	cytosol	59.94	68.85
CDY46542	Canola	cytosol	59.78	68.67
VIT_09s0002g02530.t01	Wine grape	cytosol	66.87	68.35
KRH47165	Soybean	nucleus	65.95	67.19
KRH44203	Soybean	nucleus	65.79	67.03
PGSC0003DMT400017579	Potato	cytosol	64.1	66.99
Zm00001d044503_P004	Maize	cytosol	74.88	66.3
Solyc01g068210.2.1	Tomato	nucleus	64.41	65.93
CDY33875	Canola	cytosol	62.4	65.22
CDY22863	Canola	cytosol	63.02	64.51
Bra018927.1-P	Field mustard	cytosol	63.02	64.51
AT1G51720.1	Thale cress	cytosol	62.87	64.05
Bra014299.1-P	Field mustard	cytosol	63.48	63.68
CDY18551	Canola	cytosol	31.9	61.79
KRH38711	Soybean	endoplasmic reticulum	17.1	58.73
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	9.55	50.41
TraesCS2D01G388800.1	Wheat	mitochondrion	15.56	22.65
TraesCS5D01G442000.1	Wheat	mitochondrion, plastid	15.87	22.59
TraesCS7D01G412300.1	Wheat	cytosol	5.24	20.12
TraesCS1D01G322800.1	Wheat	cytosol	2.31	20.0
TraesCS1D01G080500.1	Wheat	cytosol	2.93	17.59
TraesCS6D01G031800.1	Wheat	cytosol	2.93	17.59
TraesCS5D01G021500.1	Wheat	cytosol	3.24	15.56

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639
GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH
PFAM:PF00208	PFAM:PF02812	PRINTS:PR00082	PANTHER:PTHR43571	SMART:SM00839	SUPFAM:SSF51735
SUPFAM:SSF53223	EnsemblPlantsGene:TraesCS3D01G206100	EnsemblPlants:TraesCS3D01G206100.4	TIGR:cd05313	SEG:seg	:

Description

No Description!

Coordinates

chr3D:+:268052160..268057852

Molecular Weight (calculated)

72632.6 Da

IEP (calculated)

6.843

GRAVY (calculated)

-0.409

Length

649 amino acids

Sequence
(BLAST)

001: MNSSMDEINL LRQHQRHQQH HLSVRGIGEE IDLEIDQCED PTFSGAALEG VTSHHPQDPV VPADDHKSFL IPCSQPGAVD GQPQPTPPQA EERAGMLRLS
101: AHTKKKKKVV KKWRDEWADT YKWAYVAVHD NTSRIFCTVC KEYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QSASKEKVQT PEIERPVCVK
201: ALSKTAASIL ESLFKKDPHE AEFIQSIQEV VHSIEPVLVK NSQYVQILER LLEPERCFIF RVPWVDDRGE AHVNRGFRVQ FSQALGPCRG GLRFHPSMNL
301: SVAKFLAFEQ TLKNALSLYK LGGAAGGSDF DPKGKSEIEV MRFCQSFMDE LYRYLGPDQD FPAEDVGVGP REMGFLFGQY RRLSGHFQGN FTGPKIFWSG
401: SSFRTEATGY GLVFFARVVL ADMNKELKGL RCAISGSGKI AMHVLEKLLS CEAIPVTVSD SEGYLFDGDG FDYVKYTLIR NIKAQQRSLK EYLKTFPRAK
501: YINDAKPWGE QCDIAFPCAS QNEIDQGEAL SIISSGCRVL IECSNMPCTG QAVDILRKAK VHVAPAKATA AGGVAVGELE LNPEFSLMQW SVEDFENKIQ
601: EAVKQTYDRS MKAAQEYGIL KENPESLVHG ANISAFLNIA QAMTDQGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.