Factsheet for GSMUA_Achr8P05390_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	64.14	87.05
VIT_09s0002g02530.t01	Wine grape	cytosol	75.33	72.13
CDY46542	Canola	cytosol	66.94	72.04
CDY52956	Canola	cytosol	66.61	71.68
TraesCS3D01G206100.4	Wheat	cytosol	75.99	71.19
TraesCS3A01G202500.1	Wheat	cytosol	75.99	71.08
TraesCS3B01G227100.1	Wheat	cytosol	75.16	70.85
PGSC0003DMT400017579	Potato	cytosol	71.71	70.21
KRH44203	Soybean	nucleus	73.03	69.7
KRH47165	Soybean	nucleus	73.03	69.7
EES00914	Sorghum	cytosol	74.51	69.69
Solyc01g068210.2.1	Tomato	nucleus	72.53	69.56
CDY33875	Canola	cytosol	69.9	68.44
Os01t0558200-01	Rice	mitochondrion	77.3	68.41
AT1G51720.1	Thale cress	cytosol	70.72	67.5
CDY22863	Canola	cytosol	70.07	67.19
Bra018927.1-P	Field mustard	cytosol	70.07	67.19
Bra014299.1-P	Field mustard	cytosol	70.72	66.46
CDY18551	Canola	cytosol	35.03	63.58
KRH38711	Soybean	endoplasmic reticulum	19.57	62.96
Zm00001d044503_P004	Maize	cytosol	73.68	61.12
HORVU3Hr1G048870.1	Barley	plastid	75.99	60.23
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.35	56.1
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	17.6	26.03
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	17.27	25.55
GSMUA_Achr2P10430_001	Banana	mitochondrion	16.61	24.57
GSMUA_AchrUn_...	Banana	nucleus	4.77	15.51

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639
GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G05390_001	EnsemblPlants:GSMUA_Achr8P05390_001	EnsemblPlants:GSMUA_Achr8T05390_001	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C
InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	UniProt:M0TMU2	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH	PFAM:PF00208	PFAM:PF02812
PRINTS:PR00082	PANTHER:PTHR43571	SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI000295887C
SEG:seg	:	:	:	:	:

Description

Putative NADP-specific glutamate dehydrogenase [Source:GMGC_GENE;Acc:GSMUA_Achr8G05390_001]

Coordinates

chr8:+:3521936..3532059

Molecular Weight (calculated)

67984.7 Da

IEP (calculated)

6.992

GRAVY (calculated)

-0.331

Length

608 amino acids

Sequence
(BLAST)

001: MNSTIDEITL LHQAQARAPS HHMVMRGIGE EIDLEIGPGD DDPSFSSTTL VGVTTHEPAP QGKRKKKVVK KWREEWADTY KWAYVDVHEG TPRVFCSICR
101: EYGRKHRRNP YGNEGSRNMQ MSALEEHNNS LLHKEALRLQ MASKDKGVPV IERPVYVKAL MSKSASSILE SVLRRDPHEV EFIQCVQEVV HSLEPVLVKN
201: TQYIHILERL LEPERAIIFR VPWVDDRGET HVNRGFRVQF SQALGPCRGG LRFHPLMTLS IAKFLGFEQA LKNALSPYKL GGAGGGSDFD PKGKSEAEIM
301: RFCQSFMDEL HKYLGPDQDL PAEDLGVGPR EMGYLFGQYK RLTGHFQGSF TGPKIFWSGY SLRTEATGYG LVFFARLILA EMNKELKGLR CIVSGAGKLA
401: MHVLEKLLSC GAIPITISDS KGYLLDEDGF DYVKISLLRD IKVQQRSLRD YVKSNPRAKY FEDAKPWSEQ CDIAFPCASQ NEIDQPDAIA LVNSGCRLLI
501: EGSNMPCTSQ AIDILRKSKV LVAPAKAASA GGVAVGELEL SNECNLMQWS AEDFEAKLQD MMKQTYERSL KTASEYGYLK DNPEALVHGG NICAFLNLAH
601: AMIDQGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.