CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46542	Canola	cytosol	98.94	98.94
CDY33875	Canola	cytosol	98.05	89.21
CDY22863	Canola	cytosol	97.7	87.07
AT1G51720.1	Thale cress	cytosol	97.17	86.19
CDY18551	Canola	cytosol	45.31	76.42
VIT_09s0002g02530.t01	Wine grape	cytosol	85.66	76.22
PGSC0003DMT400017579	Potato	cytosol	80.35	73.11
KRH44203	Soybean	nucleus	81.77	72.53
GSMUA_AchrUn_...	Banana	cytosol	57.35	72.32
KRH47165	Soybean	nucleus	81.42	72.21
Solyc01g068210.2.1	Tomato	nucleus	80.18	71.45
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	15.22	69.92
KRH38711	Soybean	endoplasmic reticulum	22.48	67.2
GSMUA_Achr8P05390_001	Banana	cytosol	71.68	66.61
EES00914	Sorghum	cytosol	69.56	60.46
TraesCS3B01G227100.1	Wheat	cytosol	68.67	60.16
TraesCS3A01G202500.1	Wheat	cytosol	69.03	60.0
TraesCS3D01G206100.4	Wheat	cytosol	68.85	59.94
Os01t0558200-01	Rice	mitochondrion	70.09	57.64
Zm00001d044503_P004	Maize	cytosol	69.73	53.75
HORVU3Hr1G048870.1	Barley	plastid	69.38	51.11
CDX87065	Canola	cytosol, mitochondrion	11.33	28.19
CDY55181	Canola	mitochondrion	19.82	27.79
CDY14044	Canola	mitochondrion	19.82	27.79
CDY65233	Canola	mitochondrion	19.65	27.54
CDX70039	Canola	mitochondrion	19.47	27.3
CDX81051	Canola	mitochondrion	19.47	27.3
CDX78292	Canola	mitochondrion	19.29	27.05
CDY29969	Canola	cytosol, mitochondrion	19.47	26.76
CDY21157	Canola	cytosol, mitochondrion	19.47	26.76
CDY25453	Canola	cytosol, mitochondrion	18.76	25.79
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	9.2	25.62
CDY38492	Canola	mitochondrion	18.58	25.55
CDY64896	Canola	mitochondrion	18.94	23.41
CDY50862	Canola	cytosol, mitochondrion, plastid	19.29	16.72

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:A0A078IT17	UniProt:A0A078IT17
EnsemblPlants:CDY52956	ProteinID:CDY52956	ProteinID:CDY52956.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639	GO:GO:0055114
EnsemblPlantsGene:GSBRNA2T00008222001	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH
PFAM:PF00208	PFAM:PF02812	PRINTS:PR00082	PANTHER:PTHR43571	SMART:SM00839	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI0004EDE53A	SEG:seg	:	:	:

Description

BnaC03g77940DBnaC03g77940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT17]

Coordinates

chrLK033145:+:65127..68323

Molecular Weight (calculated)

63409.8 Da

IEP (calculated)

8.142

GRAVY (calculated)

-0.419

Length

565 amino acids

Sequence
(BLAST)

001: MVLVSDLQGE DQDMSKGQPS AKRKKKVVKR WREEWADTYK WAYVDMKEGT ARIFCSVCRE YGRKHRRNPY GNEGSRNMQM SALEEHNNSL LHKEALRLQT
101: ASKDKIVVDK PIYVKTLMSK SAGSIVEGAL KRDPNEIEFI QSVQESVHAL ERVIAKNSHY VNIMERLLEP ERMIVFRVPW IDDRGETHVN RGFRVQFNQA
201: LGPCRGGIRF HPSMNLSIAK FLGFQQTLKN ALSPYKLGGA SGGSDFDPKG RSDNELMRFC QSFMDEMYRY MGPDKDLPSE EVGVGTREMG YLFGQYRRLA
301: GQFQGSFTGP RIYWATSSLR TEASGYGVVY FARLMLADMN KEIKGLRCVV SGCGKIAMHV VEKLIACGAH PVTVSDSKGY LVDDDGFDYM KLAFLREIKS
401: QQRSLRDYSK TYARAKYFDE VKPWNERCDV AFPCASQNEV DQADAINLVN AGCRLLVEGS NMPCTAEAVD VFRKANVLIA PAIAAGAGGV AAGEIEVLRE
501: SNSMQWSAED FESRLQEALK QTYEKALKAA NDFGYQKESP EALLHGATIA AFLNIAQAMT DQGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.