CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55181	Canola	mitochondrion	99.75	99.75
CDY65233	Canola	mitochondrion	97.27	97.27
CDX70039	Canola	mitochondrion	97.02	97.02
CDX81051	Canola	mitochondrion	96.28	96.28
CDX78292	Canola	mitochondrion	96.03	96.03
CDX87065	Canola	cytosol, mitochondrion	52.85	93.83
AT5G07440.1	Thale cress	mitochondrion	95.53	93.67
PGSC0003DMT400021509	Potato	mitochondrion	90.07	88.32
Solyc03g094010.2.1	Tomato	unclear	89.58	87.83
PGSC0003DMT400041325	Potato	mitochondrion	88.34	86.62
PGSC0003DMT400070951	Potato	mitochondrion	87.84	86.13
Solyc06g033860.1.1	Tomato	unclear	87.59	85.89
VIT_16s0039g02720.t01	Wine grape	mitochondrion	87.34	85.64
VIT_16s0039g02750.t01	Wine grape	cytosol	87.34	85.64
KRH57522	Soybean	mitochondrion	87.1	85.19
KRH77294	Soybean	mitochondrion	86.85	85.16
Solyc05g052100.2.1	Tomato	unclear	86.6	84.5
KRH04228	Soybean	mitochondrion	86.35	84.47
TraesCS2B01G409300.1	Wheat	mitochondrion	82.63	81.02
GSMUA_Achr2P10430_001	Banana	mitochondrion	82.63	81.02
TraesCS2A01G389900.1	Wheat	mitochondrion	82.13	80.54
EES11206	Sorghum	mitochondrion	81.14	79.56
CDY25453	Canola	cytosol, mitochondrion	79.9	78.35
Zm00001d025984_P001	Maize	mitochondrion	79.65	78.1
VIT_00s1491g00010.t01	Wine grape	cytosol, mitochondrion	46.4	77.92
CDY38492	Canola	mitochondrion	79.16	77.62
CDY21157	Canola	cytosol, mitochondrion	79.16	77.62
CDY29969	Canola	cytosol, mitochondrion	78.91	77.37
HORVU2Hr1G093030.1	Barley	cytosol, mitochondrion	49.88	75.85
TraesCS2D01G388800.1	Wheat	mitochondrion	82.63	74.66
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	36.48	72.41
VIT_00s0204g00160.t01	Wine grape	cytosol	16.63	71.28
VIT_00s0204g00150.t01	Wine grape	cytosol, mitochondrion, plastid	31.02	71.02
CDY64896	Canola	mitochondrion	77.17	68.05
VIT_16s0039g02740.t01	Wine grape	cytosol, mitochondrion	65.26	63.84
CDY50862	Canola	cytosol, mitochondrion, plastid	76.67	47.39
CDY52956	Canola	cytosol	27.79	19.82
CDY46542	Canola	cytosol	27.54	19.65
CDY33875	Canola	cytosol	27.54	17.87
CDY22863	Canola	cytosol	27.79	17.67
CDY18551	Canola	cytosol	8.93	10.75

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:A0A078FMF9	UniProt:A0A078FMF9	EnsemblPlants:CDY14044
ProteinID:CDY14044	ProteinID:CDY14044.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00078572001
InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_AS	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:Glu_DH	InterPro:NAD(P)-bd_dom_sf
InterPro:NAD_bind_Glu_DH	PFAM:PF00208	PFAM:PF02812	PIRSF:PIRSF000185	PRINTS:PR00082	ScanProsite:PS00074
PANTHER:PTHR11606	PANTHER:PTHR11606:SF24	SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0004EE07AC

Description

BnaC02g01610DGlutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A078FMF9]

Coordinates

chrLK032040:-:120122..122698

Molecular Weight (calculated)

43567.3 Da

IEP (calculated)

6.510

GRAVY (calculated)

-0.142

Length

403 amino acids

Sequence
(BLAST)

001: MNALAATNRN FRHASRILGL DSKIEKSLMI PFREIKVECT IPKDDGTLVS YVGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCNPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV YATEALLAEY
201: GKSIKGLTFV VQGFGNVGTW AAKLIHEKGG KVVAVSDITG AVRNPEGLDI DALLSHKEAT GSLVDFSGGD AMDSNELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIIEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTNIQGFMWE EEKVNLELQK YMTRAFHNIK SMCHTHSCNL RMGAFTLGVN RVARATQLRG
401: WEA

Best Arabidopsis Sequence Match ( AT5G07440.1 )
(BLAST)

001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A

Arabidopsis Description

GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.