Factsheet for Zm00001d025984_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11206	Sorghum	mitochondrion	95.38	95.38
TraesCS2B01G409300.1	Wheat	mitochondrion	88.81	88.81
Os04t0543900-02	Rice	extracellular, mitochondrion, plasma membrane, plastid	88.81	88.81
TraesCS2A01G389900.1	Wheat	mitochondrion	88.32	88.32
HORVU2Hr1G093030.1	Barley	cytosol, mitochondrion	56.69	87.92
GSMUA_Achr2P10430_001	Banana	mitochondrion	84.43	84.43
CDX87065	Canola	cytosol, mitochondrion	45.5	82.38
TraesCS2D01G388800.1	Wheat	mitochondrion	88.81	81.84
Bra009263.1-P	Field mustard	mitochondrion	81.02	81.02
KRH04228	Soybean	mitochondrion	81.02	80.83
VIT_16s0039g02750.t01	Wine grape	cytosol	80.54	80.54
CDY65233	Canola	mitochondrion	78.83	80.4
CDX70039	Canola	mitochondrion	78.83	80.4
AT5G07440.1	Thale cress	mitochondrion	80.29	80.29
KRH77294	Soybean	mitochondrion	80.05	80.05
KRH57522	Soybean	mitochondrion	80.05	79.85
Bra028697.1-P	Field mustard	mitochondrion	79.81	79.81
VIT_16s0039g02720.t01	Wine grape	mitochondrion	79.81	79.81
Zm00001d034420_P002	Maize	plasma membrane	79.81	79.81
CDY55181	Canola	mitochondrion	78.1	79.65
CDY14044	Canola	mitochondrion	78.1	79.65
PGSC0003DMT400070951	Potato	mitochondrion	79.56	79.56
Solyc03g094010.2.1	Tomato	unclear	79.56	79.56
Bra005935.1-P	Field mustard	mitochondrion	79.32	79.32
CDX81051	Canola	mitochondrion	77.62	79.16
CDX78292	Canola	mitochondrion	77.62	79.16
PGSC0003DMT400021509	Potato	mitochondrion	78.83	78.83
Solyc06g033860.1.1	Tomato	unclear	78.35	78.35
PGSC0003DMT400041325	Potato	mitochondrion	77.62	77.62
Solyc05g052100.2.1	Tomato	unclear	76.89	76.51
VIT_16s0039g02740.t01	Wine grape	cytosol, mitochondrion	59.61	59.47
Zm00001d016419_P001	Maize	mitochondrion, plastid	22.63	42.86
Zm00001d044503_P004	Maize	cytosol	24.57	13.78

Protein Annotations

EntrezGene:100193614	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	ProteinID:AQK45242.1	ProteinID:AQK45244.1
UniProt:B4FFP2	EMBL:BT035930	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004352
GO:GO:0004353	GO:GO:0005488	GO:GO:0005507	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005773	GO:GO:0005774	GO:GO:0006520
GO:GO:0006950	GO:GO:0006995	GO:GO:0007154	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270
GO:GO:0009409	GO:GO:0009605	GO:GO:0009628	GO:GO:0009651	GO:GO:0009987	GO:GO:0009991
GO:GO:0010446	GO:GO:0016020	GO:GO:0016491	GO:GO:0016639	GO:GO:0046686	GO:GO:0050897
GO:GO:0055114	GO:GO:1901698	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_AS	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom
InterPro:Glu_DH	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH	PFAM:PF00208	PFAM:PF02812	PIRSF:PIRSF000185
PRINTS:PR00082	ScanProsite:PS00074	PANTHER:PTHR11606	PANTHER:PTHR11606:SF18	SMART:SM00839	SUPFAM:SSF51735
SUPFAM:SSF53223	UniParc:UPI00017B7235	EnsemblPlantsGene:Zm00001d025984	EnsemblPlants:Zm00001d025984_P001	EnsemblPlants:Zm00001d025984_T001	:

Description

glutamic dehydrogenase2 glutamic dehydrogenase2

Coordinates

chr10:+:135302916..135307138

Molecular Weight (calculated)

44430.2 Da

IEP (calculated)

6.095

GRAVY (calculated)

-0.130

Length

411 amino acids

Sequence
(BLAST)

001: MNALAATTRN FRRASKLLGL DSKLEQSLLI PFREIKVECT IPKDDGSLAT FVGFRVQHDN ARGPMKGGIR YHNEVDPDEV NALAQLMTWK TAVAAVPYGG
101: AKGGIGCSPG ELSRSELERL TRVFTQKIHD LIGTHTDVPA PDMGTNAQTM AWMLDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVM YATEALLAEY
201: GKCISGSTFV IQGFGNVGSW AARLIHEKGG KIIAIGDVTG SIRNTAGIDI PALVKHRNEG HAMKDFDGAE VLDSTELLVH DCDVLVPCAL GGVLNKDNAP
301: DVKAKFVIEA ANHPTDPEAD EILAKKGVVV LPDIYANSGG VVVSYFEWVQ NIQGFMWDEE KVNDELEKYM SSAFQHMKAM CKSLDCDLRM GAFTLGVNRV
401: ARATLLRGWE A

Best Arabidopsis Sequence Match ( AT5G07440.1 )
(BLAST)

001: MNALAATNRN FRHASRILGL DSKIERSLMI PFREIKVECT IPKDDGTLVS YIGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCSPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV FATEALLAEY
201: GKSIQGLTFV IQGFGNVGTW AAKLIHEKGG KVVAVSDITG AIRNPEGIDI NALIKHKDAT GSLNDFNGGD AMNSDELLIH ECDVLIPCAL GGVLNKENAG
301: DVKAKFIVEA ANHPTDPDAD EILSKKGVII LPDIYANAGG VTVSYFEWVQ NIQGFMWEEE KVNLELQKYM TRAFHNIKTM CHTHSCNLRM GAFTLGVNRV
401: ARATQLRGWE A

Arabidopsis Description

GDH2Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEW8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.