Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY64900 | Canola | cytoskeleton, cytosol, mitochondrion | 62.56 | 69.95 |
| CDY55181 | Canola | mitochondrion | 93.83 | 52.85 |
| CDY14044 | Canola | mitochondrion | 93.83 | 52.85 |
| CDX70039 | Canola | mitochondrion | 92.07 | 51.86 |
| CDY65233 | Canola | mitochondrion | 92.07 | 51.86 |
| CDX81051 | Canola | mitochondrion | 92.07 | 51.86 |
| CDX78292 | Canola | mitochondrion | 92.07 | 51.86 |
| AT5G07440.1 | Thale cress | mitochondrion | 91.19 | 50.37 |
| VIT_00s1491g00010.t01 | Wine grape | cytosol, mitochondrion | 52.42 | 49.58 |
| Solyc03g094010.2.1 | Tomato | unclear | 88.55 | 48.91 |
| PGSC0003DMT400021509 | Potato | mitochondrion | 88.11 | 48.66 |
| VIT_16s0039g02750.t01 | Wine grape | cytosol | 87.22 | 48.18 |
| KRH04228 | Soybean | mitochondrion | 86.78 | 47.82 |
| Solyc06g033860.1.1 | Tomato | unclear | 86.34 | 47.69 |
| KRH57522 | Soybean | mitochondrion | 86.34 | 47.57 |
| VIT_16s0039g02720.t01 | Wine grape | mitochondrion | 85.9 | 47.45 |
| PGSC0003DMT400070951 | Potato | mitochondrion | 85.9 | 47.45 |
| GSMUA_Achr2P10430_001 | Banana | mitochondrion | 85.9 | 47.45 |
| PGSC0003DMT400041325 | Potato | mitochondrion | 85.46 | 47.2 |
| KRH77294 | Soybean | mitochondrion | 85.46 | 47.2 |
| TraesCS2B01G409300.1 | Wheat | mitochondrion | 84.14 | 46.47 |
| TraesCS2A01G389900.1 | Wheat | mitochondrion | 84.14 | 46.47 |
| Solyc05g052100.2.1 | Tomato | unclear | 84.14 | 46.25 |
| EES11206 | Sorghum | mitochondrion | 83.7 | 46.23 |
| CDY25453 | Canola | cytosol, mitochondrion | 82.82 | 45.74 |
| CDY38492 | Canola | mitochondrion | 82.38 | 45.5 |
| Zm00001d025984_P001 | Maize | mitochondrion | 82.38 | 45.5 |
| CDY21157 | Canola | cytosol, mitochondrion | 82.38 | 45.5 |
| CDY29969 | Canola | cytosol, mitochondrion | 82.38 | 45.5 |
| VIT_00s0204g00150.t01 | Wine grape | cytosol, mitochondrion, plastid | 34.36 | 44.32 |
| TraesCS2D01G388800.1 | Wheat | mitochondrion | 84.14 | 42.83 |
| CDY64896 | Canola | mitochondrion | 81.94 | 40.7 |
| VIT_16s0039g02740.t01 | Wine grape | cytosol, mitochondrion | 67.84 | 37.38 |
| CDY50862 | Canola | cytosol, mitochondrion, plastid | 81.94 | 28.53 |
| HORVU2Hr1G093030.1 | Barley | cytosol, mitochondrion | 26.43 | 22.64 |
| CDY52956 | Canola | cytosol | 28.19 | 11.33 |
| CDY46542 | Canola | cytosol | 27.75 | 11.15 |
| CDY18551 | Canola | cytosol | 15.86 | 10.75 |
| CDY33875 | Canola | cytosol | 27.75 | 10.14 |
| CDY22863 | Canola | cytosol | 28.19 | 10.09 |
| VIT_00s0204g00160.t01 | Wine grape | cytosol | 1.32 | 3.19 |
Protein Annotations
| MapMan:25.1.6.1 | Gene3D:3.40.50.10860 | Gene3D:3.40.50.720 | GO:A0A078DD00 | EnsemblPlants:CDX87065 | ProteinID:CDX87065 |
| ProteinID:CDX87065.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006520 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00145953001 | InterPro:Glu/Leu/Phe/Val_DH | InterPro:Glu/Leu/Phe/Val_DH_AS |
| InterPro:Glu/Leu/Phe/Val_DH_dimer_dom | InterPro:NAD(P)-bd_dom_sf | PFAM:PF02812 | PRINTS:PR00082 | ScanProsite:PS00074 | PANTHER:PTHR11606 |
| PANTHER:PTHR11606:SF18 | SUPFAM:SSF51735 | SUPFAM:SSF53223 | UniParc:UPI0004EEA78C | : | : |
Description
BnaC09g03800D
Coordinates
chrLK031849:+:251868..253285
Molecular Weight (calculated)
24727.9 Da
IEP (calculated)
8.236
GRAVY (calculated)
-0.093
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MNALAATNRN FRHASRILGL DSKIEKSLMI PFREIKVECT IPKDDGTLVS YVGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVADIPYGG
101: AKGGIGCNPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV YATEALLAEY
201: GKSIKGLTFV VQVKITSDLK LNVVFII
101: AKGGIGCNPR DLSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG REAATGRGVV YATEALLAEY
201: GKSIKGLTFV VQVKITSDLK LNVVFII
001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRGFKDLKEM CQTHSCDLRM GAFTLGINRV
401: AQATTIRGWG S
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRGFKDLKEM CQTHSCDLRM GAFTLGINRV
401: AQATTIRGWG S
Arabidopsis Description
GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.