Factsheet for VIT_00s0204g00150.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
cytosol 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s1491g00010.t01	Wine grape	cytosol, mitochondrion	56.25	41.25
CDX87065	Canola	cytosol, mitochondrion	44.32	34.36
CDY14044	Canola	mitochondrion	71.02	31.02
CDY65233	Canola	mitochondrion	70.45	30.77
CDY55181	Canola	mitochondrion	70.45	30.77
CDX70039	Canola	mitochondrion	70.45	30.77
CDX78292	Canola	mitochondrion	70.45	30.77
CDX81051	Canola	mitochondrion	70.45	30.77
Bra005935.1-P	Field mustard	mitochondrion	70.45	30.17
Bra009263.1-P	Field mustard	mitochondrion	70.45	30.17
Bra028697.1-P	Field mustard	mitochondrion	69.89	29.93
KRH77294	Soybean	mitochondrion	69.89	29.93
AT5G07440.1	Thale cress	mitochondrion	68.75	29.44
VIT_16s0039g02750.t01	Wine grape	cytosol	68.75	29.44
VIT_16s0039g02720.t01	Wine grape	mitochondrion	68.18	29.2
KRH57522	Soybean	mitochondrion	68.18	29.13
VIT_16s0039g02740.t01	Wine grape	cytosol, mitochondrion	68.18	29.13
KRH04228	Soybean	mitochondrion	65.91	28.16
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	65.91	24.12
VIT_09s0002g02530.t01	Wine grape	cytosol	26.7	7.4
VIT_00s0204g00160.t01	Wine grape	cytosol	0.0	0.0

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	ProteinID:CCB62809	ProteinID:CCB62809.1	UniProt:F6I791
EMBL:FN596769	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00208	PFAM:PF02812	PANTHER:PTHR11606	PANTHER:PTHR11606:SF18	SUPFAM:SSF51735	SUPFAM:SSF53223
UniParc:UPI000210ABD0	ArrayExpress:VIT_00s0204g00150	EnsemblPlantsGene:VIT_00s0204g00150	EnsemblPlants:VIT_00s0204g00150.t01	:	:

Description

No Description!

Coordinates

chrUn:+:12252189..12254508

Molecular Weight (calculated)

18515.3 Da

IEP (calculated)

4.470

GRAVY (calculated)

0.040

Length

176 amino acids

Sequence
(BLAST)

001: MTWKTAVANI PYGGAKGGIG CRPSEMSTNE LERLTGVFTQ KIHDLIGIHS DVPAPDMGTN SQDLGGSLGR ESATGLGVVF GTEALLAEYG KLISDMKILE
101: MWVPGLQSLF MREGGKIVAV SDVTGAVTNP DGLEIPGLLK HEEATKSFKG FIGGDSMDPN DLLVHECDVL IPCALG

Best Arabidopsis Sequence Match ( AT3G03910.2 )
(BLAST)

001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ VRLENQDCMT

Arabidopsis Description

GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.