Factsheet for Bra014299.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46542	Canola	cytosol	87.33	100.0
Bra018927.1-P	Field mustard	cytosol	94.44	96.37
AT1G51720.1	Thale cress	cytosol	94.59	96.08
VIT_09s0002g02530.t01	Wine grape	cytosol	82.23	83.78
KRH44203	Soybean	nucleus	77.9	79.12
KRH47165	Soybean	nucleus	77.43	78.65
PGSC0003DMT400017579	Potato	cytosol	75.42	78.58
Solyc01g068210.2.1	Tomato	nucleus	76.04	77.6
GSMUA_AchrUn_...	Banana	cytosol	50.23	72.54
GSMUA_Achr8P05390_001	Banana	cytosol	66.46	70.72
KRH09218	Soybean	endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.29	69.92
KRH38711	Soybean	endoplasmic reticulum	19.63	67.2
EES00914	Sorghum	cytosol	64.45	64.15
TraesCS3A01G202500.1	Wheat	cytosol	63.83	63.54
TraesCS3D01G206100.4	Wheat	cytosol	63.68	63.48
TraesCS3B01G227100.1	Wheat	cytosol	63.06	63.26
Os01t0558200-01	Rice	mitochondrion	65.07	61.28
Zm00001d044503_P004	Maize	cytosol	64.61	57.03
HORVU3Hr1G048870.1	Barley	plastid	64.14	54.11
Bra028697.1-P	Field mustard	mitochondrion	17.31	27.25
Bra009263.1-P	Field mustard	mitochondrion	17.0	26.76
Bra036428.1-P	Field mustard	cytosol, mitochondrion	16.85	26.52
Bra005935.1-P	Field mustard	mitochondrion	16.85	26.52
Bra002139.1-P	Field mustard	mitochondrion	16.07	25.3
Bra031964.1-P	Field mustard	mitochondrion	14.99	17.14

Protein Annotations

Gene3D:1.10.285.10	MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra014299	EnsemblPlants:Bra014299.1
EnsemblPlants:Bra014299.1-P	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016491	GO:GO:0016639	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_C
InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	UniProt:M4DCT2	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH	PFAM:PF00208	PFAM:PF02812
PRINTS:PR00082	PANTHER:PTHR43571	SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0002545DC8
SEG:seg	:	:	:	:	:

Description

AT1G51720 (E=8e-229) | glutamate dehydrogenase, putative

Coordinates

chrA08:-:1841491..1844773

Molecular Weight (calculated)

72360.3 Da

IEP (calculated)

6.700

GRAVY (calculated)

-0.408

Length

647 amino acids

Sequence
(BLAST)

001: MFGGLGMNPS MDDINLIQQA QRHQLVVTNL GEEIDLEIGT AEDEAAFATN SLIGGTPREP STGEHDETKH MVLVSDLPGE DQDMSKGQPS AKRKKKVVKR
101: WREEWADTYK WAYVDMKEGT ARIFCSVCRE YGRKHRRNPY GNEGSRNMQM SALEEHNNSL LHKEALRLQT ASKDKIVVEK PIYVKTLMSK SAGSIVEGAL
201: KRDPNEVEFI QSVQESVHAL ERVIAKNSHY VNIMERLINF SYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI
301: AKFLGFQQTL KNALSPYKLG GASGGSDFDP KGRSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS
401: LRTEASGYGV VYFARLMLAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLREI KSQQRSLRDY SKTYARAKYF
501: DEVKPWNERC DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA
601: LKQTYEKALK AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Best Arabidopsis Sequence Match ( AT1G51720.1 )
(BLAST)

001: MFGPTGGLGM NPSMDDMNLI QQAQRHQLVV SNLGEEIDLE IGPGEDDAAF ANNSLIGGPP REPSTGEHDE TKHMVLVSDL PSEDQDISKG TPAKRKKKVV
101: KRWREEWADT YKWAYVDMKD GTARIFCSIC REYGRKHRRN PYGNEGSRNM QMSALEEHNN SLLHKEALRL QTASKDKIVV DKPIYVKTVM SKSAGSIVEG
201: ALKRDPNEIE FVQSVQESVH ALERVIAKNS HYVNIMERLL EPERMIVFRV PWIDDRGETH VNRGFRVQFN QALGPCRGGI RFHPSMNLSI AKFLGFQQTL
301: KNALSPYKLG GASGGSDFDP KGKSDNEIMR FCQSFMNEMY RYMGPDKDLP SEEVGVGTRE MGYLFGQYRR LAGQFQGSFT GPRIYWAASS LRTEASGYGV
401: VYFARLILAD MNKEIKGLRC VVSGCGKIAM HVVEKLIACG AHPVTVSDSK GYLVDDDGFD YMKLAFLRDI KSQQRSLRDY SKTYARAKYF DELKPWNERC
501: DVAFPCASQN EVDQADAINL VNAGCRLLVE GSNMPCTAEA VDVFRKANVL IAPAIAAGAG GVAAGEIEVL RESNSMQWSA EDFESRLQEA LKQTYEKALK
601: AANDFGYQKE SPEALLHGAT IAAFLNIAQA MTDQGCV

Arabidopsis Description

Amino acid dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:F4I9M9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.