Factsheet for Bra036428.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 7
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21157	Canola	cytosol, mitochondrion	100.0	100.0
CDY29969	Canola	cytosol, mitochondrion	99.27	99.27
AT3G03910.1	Thale cress	cytosol, mitochondrion	94.89	94.89
Bra002139.1-P	Field mustard	mitochondrion	91.0	91.0
KRH06711	Soybean	cytosol, mitochondrion	89.05	89.05
KRG94812	Soybean	cytosol, mitochondrion	89.05	89.05
PGSC0003DMT400021552	Potato	cytosol, mitochondrion	87.1	87.1
KRH08494	Soybean	mitochondrion	87.1	87.1
KRH70158	Soybean	extracellular, mitochondrion	86.86	86.86
Solyc10g078550.1.1	Tomato	extracellular	86.62	86.62
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	85.16	85.16
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	85.16	85.16
Os03t0794500-01	Rice	mitochondrion	84.91	84.91
OQU90838	Sorghum	cytosol, mitochondrion	84.18	84.18
TraesCS5A01G434100.1	Wheat	cytosol, mitochondrion	83.94	83.94
HORVU4Hr1G061100.1	Barley	cytosol	15.09	83.78
KRG88968	Soybean	cytosol	41.36	80.57
Bra009263.1-P	Field mustard	mitochondrion	80.05	80.05
Bra028697.1-P	Field mustard	mitochondrion	79.32	79.32
Bra005935.1-P	Field mustard	mitochondrion	79.32	79.32
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	89.05	76.09
TraesCS5D01G442000.1	Wheat	mitochondrion, plastid	83.94	75.66
TraesCS5B01G437100.2	Wheat	extracellular	83.7	75.27
TraesCS7D01G412300.1	Wheat	cytosol	28.22	68.64
TraesCS1B01G166200.2	Wheat	cytosol	21.17	64.93
Bra031964.1-P	Field mustard	mitochondrion	86.13	62.54
TraesCS1D01G322800.1	Wheat	cytosol	11.19	61.33
TraesCS1D01G080500.1	Wheat	cytosol	14.84	56.48
TraesCS5D01G021500.1	Wheat	cytosol	18.25	55.56
TraesCS6D01G031800.1	Wheat	cytosol	14.36	54.63
TraesCS1B01G472700.1	Wheat	cytosol	16.55	50.37
TraesCS7B01G165800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	12.17	39.37
Zm00001d016419_P001	Maize	mitochondrion, plastid	18.73	35.48
TraesCS7B01G339000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	21.65	28.43
Bra018927.1-P	Field mustard	cytosol	26.76	17.35
Bra014299.1-P	Field mustard	cytosol	26.52	16.85

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra036428	EnsemblPlants:Bra036428.1	EnsemblPlants:Bra036428.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0006520	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016491	GO:GO:0016639	GO:GO:0055114	InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_AS	InterPro:Glu/Leu/Phe/Val_DH_C
InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:Glu_DH	UniProt:M4F5S2	InterPro:NAD(P)-bd_dom_sf	InterPro:NAD_bind_Glu_DH	PFAM:PF00208
PFAM:PF02812	PIRSF:PIRSF000185	PRINTS:PR00082	ScanProsite:PS00074	PANTHER:PTHR11606	PANTHER:PTHR11606:SF18
SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	UniParc:UPI0002540F3B	:	:

Description

AT3G03910 (E=5e-233) GDH3 | GDH3 (GLUTAMATE DEHYDROGENASE 3); binding / catalytic/ oxidoreductase/ oxidoreductase, acting on the CH-NH2 group of donors, NAD or NADP as acceptor

Coordinates

chrA07:+:531341..533109

Molecular Weight (calculated)

44538.4 Da

IEP (calculated)

6.196

GRAVY (calculated)

-0.208

Length

411 amino acids

Sequence
(BLAST)

001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FIGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSISELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKSISGQRFV IQGFGNVGSW AAKLINEKGG KIVAVSDVTG AIKNKNGIDI SGLLEHTEEN RGIKGFDGAD SIDPDSVLVE DCDVLVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILRKKGVVI LPDIYANSGG VTVSYFEWVQ NIQGFMWEEE KVNKELQNYM TRGFKDLKEM CKTHSCDLRM GAFTLGVNRV
401: AQATVIRGWG S

Best Arabidopsis Sequence Match ( AT3G03910.1 )
(BLAST)

001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRGFKDLKEM CQTHSCDLRM GAFTLGINRV
401: AQATTIRGWG S

Arabidopsis Description

GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.