Factsheet for TraesCS5A01G434100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0794500-01	Rice	mitochondrion	96.84	96.84
OQU90838	Sorghum	cytosol, mitochondrion	95.13	95.13
Zm00001d034420_P002	Maize	plasma membrane	94.65	94.65
HORVU4Hr1G061100.1	Barley	cytosol	16.79	93.24
TraesCS5D01G442000.1	Wheat	mitochondrion, plastid	100.0	90.13
GSMUA_Achr2P12720_001	Banana	cytosol, mitochondrion	89.78	89.78
GSMUA_Achr5P02870_001	Banana	cytosol, mitochondrion	89.54	89.54
Solyc10g078550.1.1	Tomato	extracellular	87.1	87.1
PGSC0003DMT400021552	Potato	cytosol, mitochondrion	87.1	87.1
TraesCS7D01G412300.1	Wheat	cytosol	35.77	86.98
TraesCS1D01G322800.1	Wheat	cytosol	15.57	85.33
KRG94812	Soybean	cytosol, mitochondrion	84.67	84.67
AT5G18170.1	Thale cress	cytosol, mitochondrion	84.43	84.43
KRH06711	Soybean	cytosol, mitochondrion	84.43	84.43
AT3G03910.1	Thale cress	cytosol, mitochondrion	83.94	83.94
CDY29969	Canola	cytosol, mitochondrion	83.94	83.94
CDY21157	Canola	cytosol, mitochondrion	83.94	83.94
Bra036428.1-P	Field mustard	cytosol, mitochondrion	83.94	83.94
KRH08494	Soybean	mitochondrion	83.45	83.45
CDY25453	Canola	cytosol, mitochondrion	83.45	83.45
Bra002139.1-P	Field mustard	mitochondrion	82.97	82.97
CDY38492	Canola	mitochondrion	82.73	82.73
KRH70158	Soybean	extracellular, mitochondrion	82.24	82.24
TraesCS2A01G389900.1	Wheat	mitochondrion	80.54	80.54
TraesCS1B01G166200.2	Wheat	cytosol	25.55	78.36
KRG88968	Soybean	cytosol	38.93	75.83
CDY64900	Canola	cytoskeleton, cytosol, mitochondrion	37.23	75.37
CDY64896	Canola	mitochondrion	82.97	74.62
VIT_08s0007g07400.t01	Wine grape	cytoskeleton, golgi, peroxisome	86.86	74.22
TraesCS1D01G080500.1	Wheat	cytosol	19.22	73.15
TraesCS6D01G031800.1	Wheat	cytosol	18.73	71.3
TraesCS5D01G021500.1	Wheat	cytosol	21.41	65.19
TraesCS1B01G472700.1	Wheat	cytosol	20.44	62.22
Bra031964.1-P	Field mustard	mitochondrion	75.18	54.59
CDY50862	Canola	cytosol, mitochondrion, plastid	81.51	51.38
TraesCS7B01G165800.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	14.84	48.03
TraesCS7B01G339000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion	28.71	37.7
TraesCS3A01G202500.1	Wheat	cytosol	25.3	16.0

Protein Annotations

MapMan:25.1.6.1	Gene3D:3.40.50.10860	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824	GO:GO:0006520
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0016639	GO:GO:0055114
InterPro:Glu/Leu/Phe/Val_DH	InterPro:Glu/Leu/Phe/Val_DH_AS	InterPro:Glu/Leu/Phe/Val_DH_C	InterPro:Glu/Leu/Phe/Val_DH_dimer_dom	InterPro:Glu_DH	InterPro:NAD(P)-bd_dom_sf
InterPro:NAD_bind_Glu_DH	PFAM:PF00208	PFAM:PF02812	PIRSF:PIRSF000185	PRINTS:PR00082	ScanProsite:PS00074
PANTHER:PTHR11606	PANTHER:PTHR11606:SF18	SMART:SM00839	SUPFAM:SSF51735	SUPFAM:SSF53223	EnsemblPlantsGene:TraesCS5A01G434100
EnsemblPlants:TraesCS5A01G434100.1	TIGR:cd01076	:	:	:	:

Description

No Description!

Coordinates

chr5A:-:617207595..617210538

Molecular Weight (calculated)

44242.0 Da

IEP (calculated)

6.588

GRAVY (calculated)

-0.142

Length

411 amino acids

Sequence
(BLAST)

001: MNALAATSRN FKQAAKLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS YVGFRVQHDN ARGPMKGGIR YHHEVDPDEV NALAQLMTWK TAVANIPYGG
101: AKGGIGCSPG DLSISELERL TRVFTQKIHD LIGIHTDVPA PDMGTNAQTM AWILDEYSKF HGYSPAVVTG KPVDLGGSLG RDAATGRGVL FATEALLAEH
201: GKGIAGQRFV IQGFGNVGSW AAQLITEAGG KVIAISDVTG AVKNSNGIDI AKLMKHSAEN RGIKGFDGGD AVDPTSLLTE ECDVLIPAAL GGVINKDNAD
301: AIKAKYIIEA ANHPTDPEAD EILAKKGVLI LPDILANSGG VTVSYFEWVQ NIQGFMWDEE KVNRELKTYM TRAFRDTKEM CRSHHCDLRM GAFTLGVNRV
401: ARATVLRGWE A

Best Arabidopsis Sequence Match ( AT5G18170.1 )
(BLAST)

001: MNALAATNRN FKLAARLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVDPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS KLSISELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGYSPAVVTG KPIDLGGSLG RDAATGRGVM FGTEALLNEH
201: GKTISGQRFV IQGFGNVGSW AAKLISEKGG KIVAVSDITG AIKNKDGIDI PALLKHTKEH RGVKGFDGAD PIDPNSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEA ANHPTDPDAD EILSKKGVVI LPDIYANSGG VTVSYFEWVQ NIQGFMWEEE KVNDELKTYM TRSFKDLKEM CKTHSCDLRM GAFTLGVNRV
401: AQATILRGWG A

Arabidopsis Description

GDH1Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178UEK9]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.