Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 3
- golgi 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G322800.1 | Wheat | cytosol | 14.17 | 24.0 |
| KRG88968 | Soybean | cytosol | 32.28 | 19.43 |
| TraesCS7B01G339000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion | 44.88 | 18.21 |
| TraesCS5A01G434100.1 | Wheat | cytosol, mitochondrion | 48.03 | 14.84 |
| Os03t0794500-01 | Rice | mitochondrion | 44.88 | 13.87 |
| GSMUA_Achr2P12720_001 | Banana | cytosol, mitochondrion | 43.31 | 13.38 |
| OQU90838 | Sorghum | cytosol, mitochondrion | 42.52 | 13.14 |
| TraesCS5B01G437100.2 | Wheat | extracellular | 47.24 | 13.13 |
| Zm00001d034420_P002 | Maize | plasma membrane | 40.16 | 12.41 |
| CDY29969 | Canola | cytosol, mitochondrion | 39.37 | 12.17 |
| GSMUA_Achr5P02870_001 | Banana | cytosol, mitochondrion | 39.37 | 12.17 |
| CDY21157 | Canola | cytosol, mitochondrion | 39.37 | 12.17 |
| Bra036428.1-P | Field mustard | cytosol, mitochondrion | 39.37 | 12.17 |
| TraesCS1B01G166200.2 | Wheat | cytosol | 12.6 | 11.94 |
| AT3G03910.1 | Thale cress | cytosol, mitochondrion | 38.58 | 11.92 |
| KRH08494 | Soybean | mitochondrion | 38.58 | 11.92 |
| KRG94812 | Soybean | cytosol, mitochondrion | 37.8 | 11.68 |
| Solyc10g078550.1.1 | Tomato | extracellular | 37.01 | 11.44 |
| PGSC0003DMT400021552 | Potato | cytosol, mitochondrion | 37.01 | 11.44 |
| KRH06711 | Soybean | cytosol, mitochondrion | 37.01 | 11.44 |
| AT5G18170.1 | Thale cress | cytosol, mitochondrion | 37.01 | 11.44 |
| KRH70158 | Soybean | extracellular, mitochondrion | 36.22 | 11.19 |
| CDY25453 | Canola | cytosol, mitochondrion | 35.43 | 10.95 |
| Bra002139.1-P | Field mustard | mitochondrion | 35.43 | 10.95 |
| CDY64896 | Canola | mitochondrion | 38.58 | 10.72 |
| CDY38492 | Canola | mitochondrion | 34.65 | 10.71 |
| TraesCS2B01G409300.1 | Wheat | mitochondrion | 33.07 | 10.22 |
| VIT_08s0007g07400.t01 | Wine grape | cytoskeleton, golgi, peroxisome | 38.58 | 10.19 |
| HORVU4Hr1G061100.1 | Barley | cytosol | 4.72 | 8.11 |
| Bra031964.1-P | Field mustard | mitochondrion | 35.43 | 7.95 |
| CDY50862 | Canola | cytosol, mitochondrion, plastid | 37.01 | 7.21 |
| TraesCS1B01G472700.1 | Wheat | cytosol | 6.3 | 5.93 |
| CDY64900 | Canola | cytoskeleton, cytosol, mitochondrion | 4.72 | 2.96 |
| TraesCS3B01G227100.1 | Wheat | cytosol | 14.17 | 2.79 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G165800.1 | EnsemblPlantsGene:TraesCS7B01G165800 | Gene3D:3.40.50.720 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006520 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016491 | GO:GO:0055114 | InterPro:Glu/Leu/Phe/Val_DH_C |
| InterPro:NAD(P)-bd_dom_sf | ncoils:Coil | PANTHER:PTHR11606 | PANTHER:PTHR11606:SF18 | PFAM:PF00208 | SUPFAM:SSF51735 |
| MapMan:25.1.6.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:228801033..228802871
Molecular Weight (calculated)
14015.7 Da
IEP (calculated)
9.878
GRAVY (calculated)
-0.601
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMTLESVDA VLLWLKQLKD AANDISHMLE DFEDETDLNL VFGNVGSWAA QLITEAGGKV VSIRDVTGAI KNSNGIDMAK LMKHSAENRG IKGSDKRRRR
101: RPDLAAHGRV RHAHPDSSGR SHKQGQC
101: RPDLAAHGRV RHAHPDSSGR SHKQGQC
001: MNALAATNRN FKLASRLLGL DSKLEKSLLI PFREIKVECT IPKDDGTLAS FVGFRVQHDN ARGPMKGGIR YHPEVEPDEV NALAQLMTWK TAVAKIPYGG
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ VRLENQDCMT
101: AKGGIGCDPS ELSLSELERL TRVFTQKIHD LIGIHTDVPA PDMGTGPQTM AWILDEYSKF HGHSPAVVTG KPIDLGGSLG RDAATGRGVL FATEALLNEH
201: GKTISGQRFA IQGFGNVGSW AAKLISDKGG KIVAVSDVTG AIKNNNGIDI LSLLEHAEEN RGIKGFDGAD SIDPDSILVE DCDILVPAAL GGVINRENAN
301: EIKAKFIIEG ANHPTDPEAD EILKKKGVMI LPDIYANSGG VTVSYFEWVQ VRLENQDCMT
Arabidopsis Description
GSH3Glutamate dehydrogenase [Source:UniProtKB/TrEMBL;Acc:A0A178VBI2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.